Information for 18-AYTAAAATTTTWAAAA (Motif 22)

G T C A G A T C A C G T C G T A C G T A T G C A G C T A C G A T A G C T A C G T A C G T C G A T C G T A C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T C G A T G C T A G T C A C G T A C T G A C G T A C G A T A C G T C G A T C G A T C G T A C T A G A C G T
p-value:1e-10
log p-value:-2.338e+01
Information Content per bp:1.789
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.65%
Number of Background Sequences with motif54.2
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets52.8 +/- 22.2bp
Average Position of motif in Background55.4 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.61
Offset:5
Orientation:forward strand
Alignment:AYTAAAATTTTWAAAA
-----CGGTTTCAAA-
 G T C A G A T C A C G T C G T A C G T A T G C A G C T A C G A T A G C T A C G T A C G T C G A T C G T A C G T A C G T A C G T A
A C G T A C G T A C G T A C G T A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:2
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----AYTAAAATTTTWAAAA
AATGCAATAAAATTTAT----
 A C G T A C G T A C G T A C G T A C G T G T C A G A T C A C G T C G T A C G T A T G C A G C T A C G A T A G C T A C G T A C G T C G A T C G T A C G T A C G T A C G T A
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T A C G T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:3
Score:0.56
Offset:7
Orientation:forward strand
Alignment:AYTAAAATTTTWAAAA
-------ATTTGAATT
 G T C A G A T C A C G T C G T A C G T A T G C A G C T A C G A T A G C T A C G T A C G T C G A T C G T A C G T A C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

PB0148.1_Mtf1_2/Jaspar

Match Rank:4
Score:0.55
Offset:4
Orientation:forward strand
Alignment:AYTAAAATTTTWAAAA--
----AAATAAGAAAAAAC
 G T C A G A T C A C G T C G T A C G T A T G C A G C T A C G A T A G C T A C G T A C G T C G A T C G T A C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

PB0145.1_Mafb_2/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AYTAAAATTTTWAAAA--
---ANATTTTTGCAANTN
 G T C A G A T C A C G T C G T A C G T A T G C A G C T A C G A T A G C T A C G T A C G T C G A T C G T A C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

Arid5a/MA0602.1/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AYTAAAATTTTWAAAA
-CTAATATTGCTAAA-
 G T C A G A T C A C G T C G T A C G T A T G C A G C T A C G A T A G C T A C G T A C G T C G A T C G T A C G T A C G T A C G T A
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AYTAAAATTTTWAAAA
-CTAATATTGCTAAA-
 G T C A G A T C A C G T C G T A C G T A T G C A G C T A C G A T A G C T A C G T A C G T C G A T C G T A C G T A C G T A C G T A
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:8
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:AYTAAAATTTTWAAAA---
----NNNTTTNTAATACNG
 G T C A G A T C A C G T C G T A C G T A T G C A G C T A C G A T A G C T A C G T A C G T C G A T C G T A C G T A C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

PH0078.1_Hoxd13/Jaspar

Match Rank:9
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----AYTAAAATTTTWAAAA
CTACCAATAAAATTCT-----
 A C G T A C G T A C G T A C G T A C G T G T C A G A T C A C G T C G T A C G T A T G C A G C T A C G A T A G C T A C G T A C G T C G A T C G T A C G T A C G T A C G T A
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T A C G T A C G T A C G T A C G T A C G T

PH0046.1_Hoxa10/Jaspar

Match Rank:10
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----AYTAAAATTTTWAAAA
TAGGTAATAAAATTCA-----
 A C G T A C G T A C G T A C G T A C G T G T C A G A T C A C G T C G T A C G T A T G C A G C T A C G A T A G C T A C G T A C G T C G A T C G T A C G T A C G T A C G T A
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A A C G T A C G T A C G T A C G T A C G T