Information for 12-CAGCTMSAGMTMA (Motif 13)

A G T C C G T A A C T G A G T C A C G T T G C A A T G C C G T A A C T G T G A C A C G T G T C A C G T A
Reverse Opposite:
A C G T A C G T C G T A A C T G A G T C C G A T A T C G A C G T C G T A A C T G A G T C A C G T A C T G
p-value:1e-7
log p-value:-1.684e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif10.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets54.5 +/- 16.3bp
Average Position of motif in Background56.4 +/- 20.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myog/MA0500.1/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CAGCTMSAGMTMA
GACAGCTGCAG----
 A C G T A C G T A G T C C G T A A C T G A G T C A C G T T G C A A T G C C G T A A C T G T G A C A C G T G T C A C G T A
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CAGCTMSAGMTMA
AACAGCTGCAG----
 A C G T A C G T A G T C C G T A A C T G A G T C A C G T T G C A A T G C C G T A A C T G T G A C A C G T G T C A C G T A
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CAGCTMSAGMTMA
NCAGCTGCTG----
 A C G T A G T C C G T A A C T G A G T C A C G T T G C A A T G C C G T A A C T G T G A C A C G T G T C A C G T A
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CAGCTMSAGMTMA
AGCAGCTGCTNN---
 A C G T A C G T A G T C C G T A A C T G A G T C A C G T T G C A A T G C C G T A A C T G T G A C A C G T G T C A C G T A
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CAGCTMSAGMTMA
NAACAGCTGG------
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C G T T G C A A T G C C G T A A C T G T G A C A C G T G T C A C G T A
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CAGCTMSAGMTMA
NNACAGCTGC------
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C G T T G C A A T G C C G T A A C T G T G A C A C G T G T C A C G T A
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CAGCTMSAGMTMA
NAHCAGCTGD------
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C G T T G C A A T G C C G T A A C T G T G A C A C G T G T C A C G T A
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CAGCTMSAGMTMA
NGNGACAGCTGCN-----
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C G T T G C A A T G C C G T A A C T G T G A C A C G T G T C A C G T A
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CAGCTMSAGMTMA
AACAGCTG-------
 A C G T A C G T A G T C C G T A A C T G A G T C A C G T T G C A A T G C C G T A A C T G T G A C A C G T G T C A C G T A
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gata1/MA0035.3/Jaspar

Match Rank:10
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CAGCTMSAGMTMA---
-----ANAGATAAGAA
 A G T C C G T A A C T G A G T C A C G T T G C A A T G C C G T A A C T G T G A C A C G T G T C A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A