Information for 4-GCGACTGCGG (Motif 15)

A T C G G A T C A C T G T C G A G A T C G A C T A T C G T A G C A T C G A T C G
Reverse Opposite:
T A G C A T G C A T C G T A G C C T G A C A T G A G C T G T A C C T A G T A G C
p-value:1e-7
log p-value:-1.717e+01
Information Content per bp:1.701
Number of Target Sequences with motif116.0
Percentage of Target Sequences with motif12.69%
Number of Background Sequences with motif3523.3
Percentage of Background Sequences with motif7.53%
Average Position of motif in Targets51.1 +/- 26.2bp
Average Position of motif in Background49.5 +/- 33.9bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1/MA0506.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GCGACTGCGG-
GCGCCTGCGCA
 A T C G G A T C A C T G T C G A G A T C G A C T A T C G T A G C A T C G A T C G A C G T
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCGACTGCGG
CTGCGCATGCGC
 A C G T A C G T A T C G G A T C A C T G T C G A G A T C G A C T A T C G T A G C A T C G A T C G
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C

NHLH1/MA0048.2/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCGACTGCGG
CGCAGCTGCG-
 A C G T A T C G G A T C A C T G T C G A G A T C G A C T A T C G T A G C A T C G A T C G
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T

NRF(NRF)/Promoter/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCGACTGCGG--
GCGCATGCGCAC
 A T C G G A T C A C T G T C G A G A T C G A C T A T C G T A G C A T C G A T C G A C G T A C G T
A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GCGACTGCGG--
-TGCCTGAGGCN
 A T C G G A T C A C T G T C G A G A T C G A C T A T C G T A G C A T C G A T C G A C G T A C G T
A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

TFAP2A/MA0003.3/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCGACTGCGG--
-NGCCTGAGGCN
 A T C G G A T C A C T G T C G A G A T C G A C T A T C G T A G C A T C G A T C G A C G T A C G T
A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GCGACTGCGG---
----TTGCGGTTT
 A T C G G A T C A C T G T C G A G A T C G A C T A T C G T A G C A T C G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCGACTGCGG----
ANTGCCTGAGGCAAN
 A C G T A T C G G A T C A C T G T C G A G A T C G A C T A T C G T A G C A T C G A T C G A C G T A C G T A C G T A C G T
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCGACTGCGG--
-NGCCTNAGGCN
 A T C G G A T C A C T G T C G A G A T C G A C T A T C G T A G C A T C G A T C G A C G T A C G T
A C G T G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCGACTGCGG
VBSYGTCTGG--
 A C G T A C G T A T C G G A T C A C T G T C G A G A T C G A C T A T C G T A G C A T C G A T C G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T