Information for 4-TATTCCTCCA (Motif 17)

A C G T C T G A C G A T G C A T A G T C A G T C A C G T A T G C A G T C C G T A
Reverse Opposite:
G C A T C T A G A T C G C G T A A C T G A C T G C G T A C G T A G A C T C G T A
p-value:1e-5
log p-value:-1.172e+01
Information Content per bp:1.778
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif6.45%
Number of Background Sequences with motif238.6
Percentage of Background Sequences with motif0.50%
Average Position of motif in Targets52.7 +/- 29.0bp
Average Position of motif in Background50.5 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Crx/MA0467.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TATTCCTCCA
CTAATCCTCTT
 A C G T A C G T C T G A C G A T G C A T A G T C A G T C A C G T A T G C A G T C C G T A
G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T

SPIB/MA0081.1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TATTCCTCCA
--TTCCTCT-
 A C G T C T G A C G A T G C A T A G T C A G T C A C G T A T G C A G T C C G T A
A C G T A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TATTCCTCCA
NYTAATCCYB--
 A C G T A C G T A C G T C T G A C G A T G C A T A G T C A G T C A C G T A T G C A G T C C G T A
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TATTCCTCCA
TTAATCCT---
 A C G T A C G T C T G A C G A T G C A T A G T C A G T C A C G T A T G C A G T C C G T A
G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T A C G T A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:5
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------TATTCCTCCA
GNNAGCTAATCCCCCN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G A T G C A T A G T C A G T C A C G T A T G C A G T C C G T A
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TATTCCTCCA
GCTAATCC----
 A C G T A C G T A C G T C T G A C G A T G C A T A G T C A G T C A C G T A T G C A G T C C G T A
A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TATTCCTCCA
TTAATCCC---
 A C G T A C G T C T G A C G A T G C A T A G T C A G T C A C G T A T G C A G T C C G T A
G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T A C G T A C G T

PH0015.1_Crx/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TATTCCTCCA--
AGGCTAATCCCCAANG
 A C G T A C G T A C G T A C G T A C G T C T G A C G A T G C A T A G T C A G T C A C G T A T G C A G T C C G T A A C G T A C G T
G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G

GSC2/MA0891.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TATTCCTCCA
CCTAATCCGC--
 A C G T A C G T A C G T C T G A C G A T G C A T A G T C A G T C A C G T A T G C A G T C C G T A
T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TATTCCTCCA
CTTAATCCC---
 A C G T A C G T A C G T C T G A C G A T G C A T A G T C A G T C A C G T A T G C A G T C C G T A
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T A C G T