Information for 5-CHGCTCCGGGTGG (Motif 11)

G T A C G C T A A T C G A G T C A G C T A T G C A G T C A T C G A C T G A T C G C G A T A C T G C T A G
Reverse Opposite:
A G T C A G T C C G T A A T G C A G T C A T G C A C T G A T C G C T G A A C T G A T G C C A G T A C T G
p-value:1e-5
log p-value:-1.358e+01
Information Content per bp:1.777
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif5.38%
Number of Background Sequences with motif93.5
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets58.2 +/- 27.1bp
Average Position of motif in Background54.3 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:forward strand
Alignment:CHGCTCCGGGTGG
--GCTCCG-----
 G T A C G C T A A T C G A G T C A G C T A T G C A G T C A T C G A C T G A T C G C G A T A C T G C T A G
A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CHGCTCCGGGTGG--
NCNCAGCGGGGGGTC
 G T A C G C T A A T C G A G T C A G C T A T G C A G T C A T C G A C T G A T C G C G A T A C T G C T A G A C G T A C G T
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

PB0103.1_Zic3_1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CHGCTCCGGGTGG-
NCCCCCCCGGGGGGN
 A C G T G T A C G C T A A T C G A G T C A G C T A T G C A G T C A T C G A C T G A T C G C G A T A C T G C T A G A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0102.1_Zic2_1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CHGCTCCGGGTGG-
ACCCCCCCGGGGGGN
 A C G T G T A C G C T A A T C G A G T C A G C T A T G C A G T C A T C G A C T G A T C G C G A T A C T G C T A G A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

ZIC3/MA0697.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CHGCTCCGGGTGG--
NCGCAGCGGGGGGTC
 G T A C G C T A A T C G A G T C A G C T A T G C A G T C A T C G A C T G A T C G C G A T A C T G C T A G A C G T A C G T
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

PB0101.1_Zic1_1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CHGCTCCGGGTGG-
CACCCCCGGGGGGG
 G T A C G C T A A T C G A G T C A G C T A T G C A G T C A T C G A C T G A T C G C G A T A C T G C T A G A C G T
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

PB0204.1_Zfp740_2/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CHGCTCCGGGTGG-----
-ANTNCCGGGGGGAANTT
 G T A C G C T A A T C G A G T C A G C T A T G C A G T C A T C G A C T G A T C G C G A T A C T G C T A G A C G T A C G T A C G T A C G T A C G T
A C G T C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T

ZIC1/MA0696.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CHGCTCCGGGTGG--
-CACAGCGGGGGGTC
 G T A C G C T A A T C G A G T C A G C T A T G C A G T C A T C G A C T G A T C G C G A T A C T G C T A G A C G T A C G T
A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CHGCTCCGGGTGG-
----NNCAGGTGNN
 G T A C G C T A A T C G A G T C A G C T A T G C A G T C A T C G A C T G A T C G C G A T A C T G C T A G A C G T
A C G T A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CHGCTCCGGGTGG--
GGCCYCCTGCTGDGH
 G T A C G C T A A T C G A G T C A G C T A T G C A G T C A T C G A C T G A T C G C G A T A C T G C T A G A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C