Information for 10-WYTCCRGCSTGRCTSA (Motif 9)

G C A T A G C T A C G T A G T C A G T C C T A G A C T G A G T C A T G C C G A T A C T G C T A G A G T C A C G T A T C G C T G A
Reverse Opposite:
A G C T A T G C C G T A A C T G A G T C A G T C C G T A A T C G A C T G G T A C G A T C A C T G A C T G C G T A C T G A C G T A
p-value:1e-12
log p-value:-2.982e+01
Information Content per bp:1.843
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.5 +/- 29.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:WYTCCRGCSTGRCTSA
-GTCATGCHTGRCTGS
 G C A T A G C T A C G T A G T C A G T C C T A G A C T G A G T C A T G C C G A T A C T G C T A G A G T C A C G T A T C G C T G A
A C G T A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:WYTCCRGCSTGRCTSA
-TTCCCGCCWG-----
 G C A T A G C T A C G T A G T C A G T C C T A G A C T G A G T C A T G C C G A T A C T G C T A G A G T C A C G T A T C G C T G A
A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G A C G T A C G T A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-WYTCCRGCSTGRCTSA
NYTTCCCGCC-------
 A C G T G C A T A G C T A C G T A G T C A G T C C T A G A C T G A G T C A T G C C G A T A C T G C T A G A G T C A C G T A T C G C T G A
T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOS::JUN/MA0099.2/Jaspar

Match Rank:4
Score:0.59
Offset:9
Orientation:forward strand
Alignment:WYTCCRGCSTGRCTSA
---------TGACTCA
 G C A T A G C T A C G T A G T C A G T C C T A G A C T G A G T C A T G C C G A T A C T G C T A G A G T C A C G T A T C G C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G G T C A T G A C C G A T A T G C C G T A

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:WYTCCRGCSTGRCTSA
NGTCACGCTTGGCTGC
 G C A T A G C T A C G T A G T C A G T C C T A G A C T G A G T C A T G C C G A T A C T G C T A G A G T C A C G T A T C G C T G A
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:WYTCCRGCSTGRCTSA-----
-TTTMCGCTTSABTGAACACN
 G C A T A G C T A C G T A G T C A G T C C T A G A C T G A G T C A T G C C G A T A C T G C T A G A G T C A C G T A T C G C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A G C T C A G T G A C T T G A C G A T C T C A G A T G C G C A T A G C T T A C G C T G A A T C G G A C T C T A G T G C A T C G A A G T C G C T A A T G C T C G A

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-WYTCCRGCSTGRCTSA
DTTTCCCGCC-------
 A C G T G C A T A G C T A C G T A G T C A G T C C T A G A C T G A G T C A T G C C G A T A C T G C T A G A G T C A C G T A T C G C T G A
C T G A G C A T G A C T C A G T A T G C A T G C A T G C A C T G A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--WYTCCRGCSTGRCTSA
VDTTTCCCGCCA------
 A C G T A C G T G C A T A G C T A C G T A G T C A G T C C T A G A C T G A G T C A T G C C G A T A C T G C T A G A G T C A C G T A T C G C T G A
T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.56
Offset:8
Orientation:forward strand
Alignment:WYTCCRGCSTGRCTSA--
--------ATGACTCATC
 G C A T A G C T A C G T A G T C A G T C C T A G A C T G A G T C A T G C C G A T A C T G C T A G A G T C A C G T A T C G C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A C G T C A T G G C T A T A G C C G A T G T A C G C T A A C G T A T G C

E2F6/MA0471.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-WYTCCRGCSTGRCTSA
NCTTCCCGCCC------
 A C G T G C A T A G C T A C G T A G T C A G T C C T A G A C T G A G T C A T G C C G A T A C T G C T A G A G T C A C G T A T C G C T G A
A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T