Information for 9-TGGGAMKTGTAGT (Motif 7)

A G C T A C T G C T A G C T A G T C G A T G C A A C T G A G C T A C T G A C G T T C G A A C T G A G C T
Reverse Opposite:
C T G A A G T C A G C T T G C A A G T C C T G A T G A C A C G T A G C T A G T C A G T C A G T C C T G A
p-value:1e-13
log p-value:-3.186e+01
Information Content per bp:1.755
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif3.90%
Number of Background Sequences with motif347.8
Percentage of Background Sequences with motif0.79%
Average Position of motif in Targets47.0 +/- 26.2bp
Average Position of motif in Background49.1 +/- 37.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:TGGGAMKTGTAGT
-GGGAATTGTAGT
 A G C T A C T G C T A G C T A G T C G A T G C A A C T G A G C T A C T G A C G T T C G A A C T G A G C T
A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:2
Score:0.83
Offset:-6
Orientation:reverse strand
Alignment:------TGGGAMKTGTAGT-
GCMTBCTGGGAGTTGTAGTY
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G C T A G C T A G T C G A T G C A A C T G A G C T A C T G A C G T T C G A A C T G A G C T A C G T
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.82
Offset:-6
Orientation:reverse strand
Alignment:------TGGGAMKTGTAGT-
GCATTCTGGGAATTGTAGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G C T A G C T A G T C G A T G C A A C T G A G C T A C T G A C G T T C G A A C T G A G C T A C G T
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TGGGAMKTGTAGT---
----NNHTGTGGTTWN
 A G C T A C T G C T A G C T A G T C G A T G C A A C T G A G C T A C T G A C G T T C G A A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:TGGGAMKTGTAGT---
------CTGTGGTTTN
 A G C T A C T G C T A G C T A G T C G A T G C A A C T G A G C T A C T G A C G T T C G A A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.57
Offset:5
Orientation:forward strand
Alignment:TGGGAMKTGTAGT--
-----GCTGTGGTTT
 A G C T A C T G C T A G C T A G T C G A T G C A A C T G A G C T A C T G A C G T T C G A A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGGGAMKTGTAGT
AATGGAAAAT-----
 A C G T A C G T A G C T A C T G C T A G C T A G T C G A T G C A A C T G A G C T A C T G A C G T T C G A A C T G A G C T
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TGGGAMKTGTAGT--
-----NNTGTGGTTT
 A G C T A C T G C T A G C T A G T C G A T G C A A C T G A G C T A C T G A C G T T C G A A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

NFATC1/MA0624.1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TGGGAMKTGTAGT
NNTGGAAANN-----
 A C G T A C G T A G C T A C T G C T A G C T A G T C G A T G C A A C T G A G C T A C T G A C G T T C G A A C T G A G C T
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TGGGAMKTGTAGT
AATGGAAAAT-----
 A C G T A C G T A G C T A C T G C T A G C T A G T C G A T G C A A C T G A G C T A C T G A C G T T C G A A C T G A G C T
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T A C G T