Information for 4-GCYATGGCCSCCCCCC (Motif 5)

A C T G A G T C G A T C C G T A C G A T A T C G C T A G A T G C T A G C T A C G G A T C G T A C A G T C A G T C T G A C G A T C
Reverse Opposite:
C A T G A C T G T C A G T C A G C A T G C T A G A T G C A T C G A T C G G A T C A T G C C G T A G C A T C T A G A C T G G T A C
p-value:1e-15
log p-value:-3.652e+01
Information Content per bp:1.618
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif3.79%
Number of Background Sequences with motif279.5
Percentage of Background Sequences with motif0.63%
Average Position of motif in Targets46.9 +/- 24.3bp
Average Position of motif in Background48.8 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GCYATGGCCSCCCCCC
TTGCCATGGCAACN----
 A C G T A C G T A C T G A G T C G A T C C G T A C G A T A T C G C T A G A T G C T A G C T A C G G A T C G T A C A G T C A G T C T G A C G A T C
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C A C G T A C G T A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:2
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GCYATGGCCSCCCCCC---
----NRGCCCCRCCCHBNN
 A C T G A G T C G A T C C G T A C G A T A T C G C T A G A T G C T A G C T A C G G A T C G T A C A G T C A G T C T G A C G A T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GCYATGGCCSCCCCCC-
-----GGCCACRCCCMK
 A C T G A G T C G A T C C G T A C G A T A T C G C T A G A T G C T A G C T A C G G A T C G T A C A G T C A G T C T G A C G A T C A C G T
A C G T A C G T A C G T A C G T A C G T C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCYATGGCCSCCCCCC
TTGCCATGGCAACC----
 A C G T A C G T A C T G A G T C G A T C C G T A C G A T A T C G C T A G A T G C T A G C T A C G G A T C G T A C A G T C A G T C T G A C G A T C
A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C A C G T A C G T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCYATGGCCSCCCCCC
NNNNTTGACCCCTNNNN
 A C G T A C T G A G T C G A T C C G T A C G A T A T C G C T A G A T G C T A G C T A C G G A T C G T A C A G T C A G T C T G A C G A T C
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GCYATGGCCSCCCCCC
GTTGCCATGGCAACM----
 A C G T A C G T A C G T A C T G A G T C G A T C C G T A C G A T A T C G C T A G A T G C T A G C T A C G G A T C G T A C A G T C A G T C T G A C G A T C
C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C T G A C A C G T A C G T A C G T A C G T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:GCYATGGCCSCCCCCC
-------CCCCCCCC-
 A C T G A G T C G A T C C G T A C G A T A T C G C T A G A T G C T A G C T A C G G A T C G T A C A G T C A G T C T G A C G A T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A T G C A G T C A G T C G A T C A G T C A G T C A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GCYATGGCCSCCCCCC---
---TCGACCCCGCCCCTAT
 A C T G A G T C G A T C C G T A C G A T A T C G C T A G A T G C T A G C T A C G G A T C G T A C A G T C A G T C T G A C G A T C A C G T A C G T A C G T
A C G T A C G T A C G T G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:9
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GCYATGGCCSCCCCCC
CGGTTGCCATGGCAAC-----
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C G A T C C G T A C G A T A T C G C T A G A T G C T A G C T A C G G A T C G T A C A G T C A G T C T G A C G A T C
A G T C A T C G C T A G A G C T G A C T C T A G A G T C A G T C G C T A C A G T T C A G T C A G G A T C C T G A T C G A G A T C A C G T A C G T A C G T A C G T A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GCYATGGCCSCCCCCC
GTTGCCATGGCAAC-----
 A C G T A C G T A C G T A C T G A G T C G A T C C G T A C G A T A T C G C T A G A T G C T A G C T A C G G A T C G T A C A G T C A G T C T G A C G A T C
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C A C G T A C G T A C G T A C G T A C G T