Information for 12-AAGGCCAAAGTGA (Motif 8)

C G T A C G T A A C T G A C T G A G T C A G T C C G T A G T C A C G T A A T C G A G C T A C T G C G T A
Reverse Opposite:
A C G T A G T C C T G A A T G C A C G T A C G T A C G T A C T G C T A G A G T C A G T C A C G T A C G T
p-value:1e-10
log p-value:-2.451e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.6 +/- 21.2bp
Average Position of motif in Background55.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AAGGCCAAAGTGA--
NAGGTCACNNTGACC
 C G T A C G T A A C T G A C T G A G T C A G T C C G T A G T C A C G T A A T C G A G C T A C T G C G T A A C G T A C G T
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-AAGGCCAAAGTGA
CAAGGHCANV----
 A C G T C G T A C G T A A C T G A C T G A G T C A G T C C G T A G T C A C G T A A T C G A G C T A C T G C G T A
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AAGGCCAAAGTGA
AAGGTCAC-----
 C G T A C G T A A C T G A C T G A G T C A G T C C G T A G T C A C G T A A T C G A G C T A C T G C G T A
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T

ESR1/MA0112.3/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AAGGCCAAAGTGA----
AAGGTCACGGTGACCTG
 C G T A C G T A A C T G A C T G A G T C A G T C C G T A G T C A C G T A A T C G A G C T A C T G C G T A A C G T A C G T A C G T A C G T
C T G A T C G A A C T G C T A G A C G T G A T C C T G A T G A C T A C G T C A G A G C T C T A G T C G A A T G C G T A C A G C T A C T G

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AAGGCCAAAGTGA
BTCAAGGTCA------
 A C G T A C G T A C G T C G T A C G T A A C T G A C T G A G T C A G T C C G T A G T C A C G T A A T C G A G C T A C T G C G T A
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AAGGCCAAAGTGA
NTCAAGGTCA------
 A C G T A C G T A C G T C G T A C G T A A C T G A C T G A G T C A G T C C G T A G T C A C G T A A T C G A G C T A C T G C G T A
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AAGGCCAAAGTGA
TCAAGGTCAN-----
 A C G T A C G T C G T A C G T A A C T G A C T G A G T C A G T C C G T A G T C A C G T A A T C G A G C T A C T G C G T A
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AAGGCCAAAGTGA
TCAAGGTCAT-----
 A C G T A C G T C G T A C G T A A C T G A C T G A G T C A G T C C G T A G T C A C G T A A T C G A G C T A C T G C G T A
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T A C G T A C G T A C G T

LEF1/MA0768.1/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AAGGCCAAAGTGA-
AAAGATCAAAGGGTT
 A C G T C G T A C G T A A C T G A C T G A G T C A G T C C G T A G T C A C G T A A T C G A G C T A C T G C G T A A C G T
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

ESRRB/MA0141.3/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AAGGCCAAAGTGA
TCAAGGTCATA----
 A C G T A C G T C G T A C G T A A C T G A C T G A G T C A G T C C G T A G T C A C G T A A T C G A G C T A C T G C G T A
G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T A C G T A C G T A C G T