Information for 1-SKCVGCCGCCATYTTG (Motif 1)

A T C G A C T G A G T C T A C G C A T G A T G C T A G C C A T G A G T C A G T C G C T A A G C T A G C T C A G T A G C T C A T G
Reverse Opposite:
G T A C T C G A G T C A T C G A C T G A C A G T A C T G A C T G G T A C A T C G T A C G G T A C A T G C T C A G T G A C T A G C
p-value:1e-394
log p-value:-9.081e+02
Information Content per bp:1.585
Number of Target Sequences with motif392.0
Percentage of Target Sequences with motif44.90%
Number of Background Sequences with motif992.8
Percentage of Background Sequences with motif2.21%
Average Position of motif in Targets51.3 +/- 18.2bp
Average Position of motif in Background51.4 +/- 36.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.96
Offset:4
Orientation:reverse strand
Alignment:SKCVGCCGCCATYTTG
----GCNGCCATCTTG
 A T C G A C T G A G T C T A C G C A T G A T G C T A G C C A T G A G T C A G T C G C T A A G C T A G C T C A G T A G C T C A T G
A C G T A C G T A C G T A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.94
Offset:4
Orientation:reverse strand
Alignment:SKCVGCCGCCATYTTG
----GCCGCCATCTTG
 A T C G A C T G A G T C T A C G C A T G A T G C T A G C C A T G A G T C A G T C G C T A A G C T A G C T C A G T A G C T C A T G
A C G T A C G T A C G T A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.83
Offset:3
Orientation:forward strand
Alignment:SKCVGCCGCCATYTTG
---GTCCGCCATTA--
 A T C G A C T G A G T C T A C G C A T G A T G C T A G C C A T G A G T C A G T C G C T A A G C T A G C T C A G T A G C T C A T G
A C G T A C G T A C G T C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.64
Offset:7
Orientation:forward strand
Alignment:SKCVGCCGCCATYTTG-
-------GCCATCTGTT
 A T C G A C T G A G T C T A C G C A T G A T G C T A G C C A T G A G T C A G T C G C T A A G C T A G C T C A G T A G C T C A T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

PB0164.1_Smad3_2/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-SKCVGCCGCCATYTTG
TACGCCCCGCCACTCTG
 A C G T A T C G A C T G A G T C T A C G C A T G A T G C T A G C C A T G A G T C A G T C G C T A A G C T A G C T C A G T A G C T C A T G
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:SKCVGCCGCCATYTTG
------TGCCAA----
 A T C G A C T G A G T C T A C G C A T G A T G C T A G C C A T G A G T C A G T C G C T A A G C T A G C T C A G T A G C T C A T G
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:SKCVGCCGCCATYTTG----
---CCNNACCATCTGGCCTN
 A T C G A C T G A G T C T A C G C A T G A T G C T A G C C A T G A G T C A G T C G C T A A G C T A G C T C A G T A G C T C A T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.61
Offset:4
Orientation:forward strand
Alignment:SKCVGCCGCCATYTTG
----CGTGCCAAG---
 A T C G A C T G A G T C T A C G C A T G A T G C T A G C C A T G A G T C A G T C G C T A A G C T A G C T C A G T A G C T C A T G
A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:9
Score:0.60
Offset:8
Orientation:forward strand
Alignment:SKCVGCCGCCATYTTG
--------CCTTTGTT
 A T C G A C T G A G T C T A C G C A T G A T G C T A G C C A T G A G T C A G T C G C T A A G C T A G C T C A G T A G C T C A T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

PB0132.1_Hbp1_2/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:SKCVGCCGCCATYTTG----
---TGTTCCCATTGTGTACT
 A T C G A C T G A G T C T A C G C A T G A T G C T A G C C A T G A G T C A G T C G C T A A G C T A G C T C A G T A G C T C A T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T