Information for 1-CAARATGGCGGCNNNN (Motif 1)

T A G C G T C A G C T A T C G A C G T A A C G T A C T G A C T G G T A C A C T G A C T G G A T C T G A C T A C G A G T C A C G T
Reverse Opposite:
T C G A C T A G A T G C A C T G C T A G T G A C T G A C C A T G G T A C A G T C C G T A A C G T A G C T C G A T A C G T A T C G
p-value:1e-239
log p-value:-5.513e+02
Information Content per bp:1.569
Number of Target Sequences with motif310.0
Percentage of Target Sequences with motif37.21%
Number of Background Sequences with motif1410.8
Percentage of Background Sequences with motif3.06%
Average Position of motif in Targets52.3 +/- 18.7bp
Average Position of motif in Background50.9 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.97
Offset:0
Orientation:forward strand
Alignment:CAARATGGCGGCNNNN
CAAGATGGCGGC----
 T A G C G T C A G C T A T C G A C G T A A C G T A C T G A C T G G T A C A C T G A C T G G A T C T G A C T A C G A G T C A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T A C G T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.93
Offset:0
Orientation:forward strand
Alignment:CAARATGGCGGCNNNN
CAAGATGGCGGC----
 T A G C G T C A G C T A T C G A C G T A A C G T A C T G A C T G G T A C A C T G A C T G G A T C T G A C T A C G A G T C A C G T
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.80
Offset:2
Orientation:reverse strand
Alignment:CAARATGGCGGCNNNN
--TAATGGCGGNC---
 T A G C G T C A G C T A T C G A C G T A A C G T A C T G A C T G G T A C A C T G A C T G G A T C T G A C T A C G A G T C A C G T
A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T A C G T A C G T

E2F2/MA0864.1/Jaspar

Match Rank:4
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CAARATGGCGGCNNNN-
-AAAATGGCGCCATTTT
 T A G C G T C A G C T A T C G A C G T A A C G T A C T G A C T G G T A C A C T G A C T G G A T C T G A C T A C G A G T C A C G T A C G T
A C G T C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T

E2F3/MA0469.2/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CAARATGGCGGCNNNN--
AAAAATGGCGCCATTTTT
 T A G C G T C A G C T A T C G A C G T A A C G T A C T G A C T G G T A C A C T G A C T G G A T C T G A C T A C G A G T C A C G T A C G T A C G T
C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CAARATGGCGGCNNNN
AACAGATGGC-------
 A C G T T A G C G T C A G C T A T C G A C G T A A C G T A C T G A C T G G T A C A C T G A C T G G A T C T G A C T A C G A G T C A C G T
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CAARATGGCGGCNNNN
NNTNNACAATGGGANNN---
 A C G T A C G T A C G T A C G T T A G C G T C A G C T A T C G A C G T A A C G T A C T G A C T G G T A C A C T G A C T G G A T C T G A C T A C G A G T C A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CAARATGGCGGCNNNN
VRAACAATGG--------
 A C G T A C G T T A G C G T C A G C T A T C G A C G T A A C G T A C T G A C T G G T A C A C T G A C T G G A T C T G A C T A C G A G T C A C G T
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CAARATGGCGGCNNNN
AACAAAGG--------
 T A G C G T C A G C T A T C G A C G T A A C G T A C T G A C T G G T A C A C T G A C T G G A T C T G A C T A C G A G T C A C G T
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Neurog1/MA0623.1/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CAARATGGCGGCNNNN
ACCATATGGT-------
 A C G T T A G C G T C A G C T A T C G A C G T A A C G T A C T G A C T G G T A C A C T G A C T G G A T C T G A C T A C G A G T C A C G T
C T G A T A G C T G A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T