Information for 5-GAGTTGTAGT (Motif 3)

A C T G G T C A C T A G G A C T A C G T A C T G A C G T G T C A A C T G A C G T
Reverse Opposite:
C G T A G T A C C A G T C G T A A G T C C G T A C T G A A G T C A C G T A G T C
p-value:1e-18
log p-value:-4.181e+01
Information Content per bp:1.879
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.41%
Number of Background Sequences with motif67.7
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets43.9 +/- 26.0bp
Average Position of motif in Background43.9 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--GAGTTGTAGT
GGGAATTGTAGT
 A C G T A C G T A C T G G T C A C T A G G A C T A C G T A C T G A C G T G T C A A C T G A C G T
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:2
Score:0.76
Offset:-9
Orientation:reverse strand
Alignment:---------GAGTTGTAGT-
GCMTBCTGGGAGTTGTAGTY
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T C A C T A G G A C T A C G T A C T G A C G T G T C A A C T G A C G T A C G T
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.71
Offset:-9
Orientation:reverse strand
Alignment:---------GAGTTGTAGT-
GCATTCTGGGAATTGTAGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T C A C T A G G A C T A C G T A C T G A C G T G T C A A C T G A C G T A C G T
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

PB0032.1_IRC900814_1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GAGTTGTAGT----
GNNATTTGTCGTAANN
 A C G T A C G T A C T G G T C A C T A G G A C T A C G T A C T G A C G T G T C A A C T G A C G T A C G T A C G T A C G T A C G T
T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T

PB0120.1_Foxj1_2/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GAGTTGTAGT-----
GTNTTGTTGTGANNT
 A C T G G T C A C T A G G A C T A C G T A C T G A C G T G T C A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GAGTTGTAGT--
--GCTGTGGTTT
 A C T G G T C A C T A G G A C T A C G T A C T G A C G T G T C A A C T G A C G T A C G T A C G T
A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

PB0122.1_Foxk1_2/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GAGTTGTAGT---
NNNTGTTGTTGTTNG
 A C G T A C G T A C T G G T C A C T A G G A C T A C G T A C T G A C G T G T C A A C T G A C G T A C G T A C G T A C G T
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GAGTTGTAGT---
-NNHTGTGGTTWN
 A C T G G T C A C T A G G A C T A C G T A C T G A C G T G T C A A C T G A C G T A C G T A C G T A C G T
A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GAGTTGTAGT---
---CTGTGGTTTN
 A C T G G T C A C T A G G A C T A C G T A C T G A C G T G T C A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GAGTTGTAGT--
--NNTGTGGTTT
 A C T G G T C A C T A G G A C T A C G T A C T G A C G T G T C A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T