Information for 7-GCCGGCTKCAGGYCAC (Motif 14)

A C T G A T G C A G T C A C T G A T C G A G T C A G C T A C G T A G T C G T C A A C T G A C T G A G C T A G T C G T C A G T A C
Reverse Opposite:
A C T G A C G T A C T G T C G A A G T C A G T C A C G T A C T G G T C A C T G A C T A G A T G C A G T C A C T G A T C G A G T C
p-value:1e-10
log p-value:-2.359e+01
Information Content per bp:1.820
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.7 +/- 27.1bp
Average Position of motif in Background33.1 +/- 9.2bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF/MA0139.1/Jaspar

Match Rank:1
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GCCGGCTKCAGGYCAC
TAGCGCCCCCTGGTGGCCA-
 A C G T A C G T A C G T A C G T A C T G A T G C A G T C A C T G A T C G A G T C A G C T A C G T A G T C G T C A A C T G A C T G A G C T A G T C G T C A G T A C
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.56
Offset:-7
Orientation:forward strand
Alignment:-------GCCGGCTKCAGGYCAC
CNNBRGCGCCCCCTGSTGGC---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G T C A C T G A T C G A G T C A G C T A C G T A G T C G T C A A C T G A C T G A G C T A G T C G T C A G T A C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.55
Offset:8
Orientation:forward strand
Alignment:GCCGGCTKCAGGYCAC
--------AAGGTCAC
 A C T G A T G C A G T C A C T G A T C G A G T C A G C T A C G T A G T C G T C A A C T G A C T G A G C T A G T C G T C A G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.55
Offset:9
Orientation:forward strand
Alignment:GCCGGCTKCAGGYCAC
---------AGGTCA-
 A C T G A T G C A G T C A C T G A T C G A G T C A G C T A C G T A G T C G T C A A C T G A C T G A G C T A G T C G T C A G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GCCGGCTKCAGGYCAC
----GCCTCAGGGCAT
 A C T G A T G C A G T C A C T G A T C G A G T C A G C T A C G T A G T C G T C A A C T G A C T G A G C T A G T C G T C A G T A C
A C G T A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.54
Offset:7
Orientation:forward strand
Alignment:GCCGGCTKCAGGYCAC
-------TRAGGTCA-
 A C T G A T G C A G T C A C T G A T C G A G T C A G C T A C G T A G T C G T C A A C T G A C T G A G C T A G T C G T C A G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GCCGGCTKCAGGYCAC
ANAGTGCCACCTGGTGGCCA-
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G T C A C T G A T C G A G T C A G C T A C G T A G T C G T C A A C T G A C T G A G C T A G T C G T C A G T A C
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:8
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GCCGGCTKCAGGYCAC
----SCCTSAGGSCAW
 A C T G A T G C A G T C A C T G A T C G A G T C A G C T A C G T A G T C G T C A A C T G A C T G A G C T A G T C G T C A G T A C
A C G T A C G T A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

ELK4/MA0076.2/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GCCGGCTKCAGGYCAC
--CCACTTCCGGC---
 A C T G A T G C A G T C A C T G A T C G A G T C A G C T A C G T A G T C G T C A A C T G A C T G A G C T A G T C G T C A G T A C
A C G T A C G T A T G C A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C T G A T C G A G T C A C G T A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:10
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GCCGGCTKCAGGYCAC---
---CGCGCCGGGTCACGTA
 A C T G A T G C A G T C A C T G A T C G A G T C A G C T A C G T A G T C G T C A A C T G A C T G A G C T A G T C G T C A G T A C A C G T A C G T A C G T
A C G T A C G T A C G T T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A