Information for 1-GCCGCCATBTTGN (Motif 1)

C T A G T A G C T G A C C A T G A G T C A G T C C G T A A C G T A C G T C G A T A G C T A C T G T A C G
Reverse Opposite:
A T G C G T A C T C G A G C T A T G C A C G T A C G A T A C T G A C T G G T A C A C T G A T C G G A T C
p-value:1e-440
log p-value:-1.015e+03
Information Content per bp:1.607
Number of Target Sequences with motif451.0
Percentage of Target Sequences with motif50.96%
Number of Background Sequences with motif1252.2
Percentage of Background Sequences with motif2.80%
Average Position of motif in Targets52.3 +/- 18.7bp
Average Position of motif in Background52.2 +/- 38.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:GCCGCCATBTTGN
GCNGCCATCTTG-
 C T A G T A G C T G A C C A T G A G T C A G T C C G T A A C G T A C G T C G A T A G C T A C T G T A C G
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:GCCGCCATBTTGN
GCCGCCATCTTG-
 C T A G T A G C T G A C C A T G A G T C A G T C C G T A A C G T A C G T C G A T A G C T A C T G T A C G
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-GCCGCCATBTTGN
GTCCGCCATTA---
 A C G T C T A G T A G C T G A C C A T G A G T C A G T C C G T A A C G T A C G T C G A T A G C T A C T G T A C G
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GCCGCCATBTTGN
--TGCCAA-----
 C T A G T A G C T G A C C A T G A G T C A G T C C G T A A C G T A C G T C G A T A G C T A C T G T A C G
A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GCCGCCATBTTGN
--GGCCATTAAC-
 C T A G T A G C T G A C C A T G A G T C A G T C C G T A A C G T A C G T C G A T A G C T A C T G T A C G
A C G T A C G T C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C A C G T

E2F2/MA0864.1/Jaspar

Match Rank:6
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GCCGCCATBTTGN
AAAATGGCGCCATTTT--
 A C G T A C G T A C G T A C G T A C G T C T A G T A G C T G A C C A T G A G T C A G T C C G T A A C G T A C G T C G A T A G C T A C T G T A C G
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GCCGCCATBTTGN
TACGCCCCGCCACTCTG-
 A C G T A C G T A C G T A C G T A C G T C T A G T A G C T G A C C A T G A G T C A G T C C G T A A C G T A C G T C G A T A G C T A C T G T A C G
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T

E2F3/MA0469.2/Jaspar

Match Rank:8
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------GCCGCCATBTTGN
AAAAATGGCGCCATTTTT-
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A G C T G A C C A T G A G T C A G T C C G T A A C G T A C G T C G A T A G C T A C T G T A C G
T C G A T C G A C G T A G C T A C G T A C A G T A T C G A C T G A T G C A C T G A T G C T A G C G T C A G C A T C G A T G C A T A G C T G A C T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCCGCCATBTTGN
CGTGCCAAG----
 C T A G T A G C T G A C C A T G A G T C A G T C C G T A A C G T A C G T C G A T A G C T A C T G T A C G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GCCGCCATBTTGN
---GCCATCTGTT
 C T A G T A G C T G A C C A T G A G T C A G T C C G T A A C G T A C G T C G A T A G C T A C T G T A C G
A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T