Information for 2-TGGGGHTTGTAGTTTG (Motif 3)

G A C T A C T G A C T G T C A G C T A G G A T C A G C T A C G T A C T G A C G T C T G A C T A G A C G T A G C T A G C T A C T G
Reverse Opposite:
T G A C T C G A C T G A G T C A A G T C G A C T T C G A G T A C T G C A T C G A C A T G G A T C A G T C G T A C G T A C C T G A
p-value:1e-22
log p-value:-5.140e+01
Information Content per bp:1.643
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif3.30%
Number of Background Sequences with motif121.6
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets48.5 +/- 27.8bp
Average Position of motif in Background49.9 +/- 33.7bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:TGGGGHTTGTAGTTTG
-GGGAATTGTAGT---
 G A C T A C T G A C T G T C A G C T A G G A T C A G C T A C G T A C T G A C G T C T G A C T A G A C G T A G C T A G C T A C T G
A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T A C G T A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:2
Score:0.76
Offset:-6
Orientation:reverse strand
Alignment:------TGGGGHTTGTAGTTTG
GCMTBCTGGGAGTTGTAGTY--
 A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C T G A C T G T C A G C T A G G A T C A G C T A C G T A C T G A C G T C T G A C T A G A C G T A G C T A G C T A C T G
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C A C G T A C G T

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.73
Offset:-6
Orientation:reverse strand
Alignment:------TGGGGHTTGTAGTTTG
GCATTCTGGGAATTGTAGTT--
 A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C T G A C T G T C A G C T A G G A T C A G C T A C G T A C T G A C G T C T G A C T A G A C G T A G C T A G C T A C T G
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:TGGGGHTTGTAGTTTG
-----NNTGTGGTTT-
 G A C T A C T G A C T G T C A G C T A G G A T C A G C T A C G T A C T G A C G T C T G A C T A G A C G T A G C T A G C T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:TGGGGHTTGTAGTTTG
------CTGTGGTTTN
 G A C T A C T G A C T G T C A G C T A G G A T C A G C T A C G T A C T G A C G T C T G A C T A G A C G T A G C T A G C T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:TGGGGHTTGTAGTTTG
-----TTTGCGGTTT-
 G A C T A C T G A C T G T C A G C T A G G A T C A G C T A C G T A C T G A C G T C T G A C T A G A C G T A G C T A G C T A C T G
A C G T A C G T A C G T A C G T A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:TGGGGHTTGTAGTTTG
------TTGCGGTTT-
 G A C T A C T G A C T G T C A G C T A G G A T C A G C T A C G T A C T G A C G T C T G A C T A G A C G T A G C T A G C T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TGGGGHTTGTAGTTTG
----GTCTGTGGTTT-
 G A C T A C T G A C T G T C A G C T A G G A T C A G C T A C G T A C T G A C G T C T G A C T A G A C G T A G C T A G C T A C T G
A C G T A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TGGGGHTTGTAGTTTG
----NNHTGTGGTTWN
 G A C T A C T G A C T G T C A G C T A G G A T C A G C T A C G T A C T G A C G T C T G A C T A G A C G T A G C T A G C T A C T G
A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.58
Offset:5
Orientation:forward strand
Alignment:TGGGGHTTGTAGTTTG
-----GCTGTGGTTT-
 G A C T A C T G A C T G T C A G C T A G G A T C A G C T A C G T A C T G A C G T C T G A C T A G A C G T A G C T A G C T A C T G
A C G T A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T