Information for 5-AGCGCCGCCATTGCTG (Motif 15)

T G C A T A C G G T A C A T C G A T G C G T A C A C T G A G T C A G T C C G T A A G C T C G A T C T A G A G T C C G A T A C T G
Reverse Opposite:
A G T C C G T A C T A G A G T C G C T A C T G A A C G T C T A G A C T G A G T C C A T G A T C G A T G C A C T G A T G C A C G T
p-value:1e-11
log p-value:-2.743e+01
Information Content per bp:1.765
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif14.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets57.9 +/- 18.4bp
Average Position of motif in Background50.6 +/- 48.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.1/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AGCGCCGCCATTGCTG
--GTCCGCCATTA---
 T G C A T A C G G T A C A T C G A T G C G T A C A C T G A G T C A G T C C G T A A G C T C G A T C T A G A G T C C G A T A C T G
A C G T A C G T C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AGCGCCGCCATTGCTG
TACGCCCCGCCACTCTG-
 A C G T A C G T T G C A T A C G G T A C A T C G A T G C G T A C A C T G A G T C A G T C C G T A A G C T C G A T C T A G A G T C C G A T A C T G
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T

YY1(Zf)/Promoter/Homer

Match Rank:3
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AGCGCCGCCATTGCTG
---GCCGCCATCTTG-
 T G C A T A C G G T A C A T C G A T G C G T A C A C T G A G T C A G T C C G T A A G C T C G A T C T A G A G T C C G A T A C T G
A C G T A C G T A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AGCGCCGCCATTGCTG
CCTTCGGCGCCAAAAGG-
 A C G T A C G T T G C A T A C G G T A C A T C G A T G C G T A C A C T G A G T C A G T C C G T A A G C T C G A T C T A G A G T C C G A T A C T G
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGCGCCGCCATTGCTG
AGCTCGGCGCCAAAAGC-
 A C G T A C G T T G C A T A C G G T A C A T C G A T G C G T A C A C T G A G T C A G T C C G T A A G C T C G A T C T A G A G T C C G A T A C T G
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C A C G T

YY1/MA0095.2/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AGCGCCGCCATTGCTG
---GCNGCCATCTTG-
 T G C A T A C G G T A C A T C G A T G C G T A C A C T G A G T C A G T C C G T A A G C T C G A T C T A G A G T C C G A T A C T G
A C G T A C G T A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T

PB0127.1_Gata6_2/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGCGCCGCCATTGCTG--
-GCGGCGATATCGCAGCG
 T G C A T A C G G T A C A T C G A T G C G T A C A C T G A G T C A G T C C G T A A G C T C G A T C T A G A G T C C G A T A C T G A C G T A C G T
A C G T C A T G A T G C A T C G T C A G G T A C C A T G T G C A C A G T G T C A A C G T G T A C C A T G A T G C T G C A A T C G G A T C C A G T

SOX9/MA0077.1/Jaspar

Match Rank:8
Score:0.52
Offset:7
Orientation:forward strand
Alignment:AGCGCCGCCATTGCTG
-------CCATTGTTC
 T G C A T A C G G T A C A T C G A T G C G T A C A C T G A G T C A G T C C G T A A G C T C G A T C T A G A G T C C G A T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:AGCGCCGCCATTGCTG
--NGTTGCCATGGCAA
 T G C A T A C G G T A C A T C G A T G C G T A C A C T G A G T C A G T C C G T A A G C T C G A T C T A G A G T C C G A T A C T G
A C G T A C G T A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

POL006.1_BREu/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AGCGCCGCCATTGCTG
-AGCGCGCC-------
 T G C A T A C G G T A C A T C G A T G C G T A C A C T G A G T C A G T C C G T A A G C T C G A T C T A G A G T C C G A T A C T G
A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T