Information for 12-GACGTGCCGT (Motif 11)

A C T G C T G A A T G C A T C G G C A T A C T G T A G C A G T C A C T G A C G T
Reverse Opposite:
C G T A A G T C A C T G A C T G A G T C C G T A A T G C A T C G A G C T A G T C
p-value:1e-8
log p-value:-1.995e+01
Information Content per bp:1.865
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif19.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets58.8 +/- 23.9bp
Average Position of motif in Background46.4 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GACGTGCCGT
TACGTGCV--
 A C T G C T G A A T G C A T C G G C A T A C T G T A G C A G T C A C T G A C G T
A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GACGTGCCGT
GGACGTGC---
 A C G T A C T G C T G A A T G C A T C G G C A T A C T G T A G C A G T C A C T G A C G T
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GACGTGCCGT
RTACGTGC---
 A C G T A C T G C T G A A T G C A T C G G C A T A C T G T A G C A G T C A C T G A C G T
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T A C G T

XBP1/MA0844.1/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GACGTGCCGT-
GATGACGTGGCANT
 A C G T A C G T A C G T A C T G C T G A A T G C A T C G G C A T A C T G T A G C A G T C A C T G A C G T A C G T
T C A G T G C A G A C T A C T G T C G A G A T C C T A G G A C T T C A G C A T G G T A C T G C A G A C T G C A T

CREB3L1/MA0839.1/Jaspar

Match Rank:5
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GACGTGCCGT
TGATGACGTGGCAN
 A C G T A C G T A C G T A C G T A C T G C T G A A T G C A T C G G C A T A C T G T A G C A G T C A C T G A C G T
G A C T C T A G T C G A G A C T A C T G G C T A A G T C A T C G A G C T C T A G C A T G G A T C C T G A A G C T

CREB3/MA0638.1/Jaspar

Match Rank:6
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GACGTGCCGT
NGATGACGTGGCAN
 A C G T A C G T A C G T A C G T A C T G C T G A A T G C A T C G G C A T A C T G T A G C A G T C A C T G A C G T
A G C T C A T G T C G A G A C T A C T G C G T A G A T C A C T G C G A T A T C G C A T G G T A C T C G A A G T C

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:7
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GACGTGCCGT
GGGTACGTGC---
 A C G T A C G T A C G T A C T G C T G A A T G C A T C G G C A T A C T G T A G C A G T C A C T G A C G T
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T A C G T A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:8
Score:0.65
Offset:4
Orientation:forward strand
Alignment:GACGTGCCGT
----TGACGT
 A C T G C T G A A T G C A T C G G C A T A C T G T A G C A G T C A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C G T A A G T C A C T G G A C T

Hes2/MA0616.1/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GACGTGCCGT--
GCACGTGTCNNNN
 A C G T A C T G C T G A A T G C A T C G G C A T A C T G T A G C A G T C A C T G A C G T A C G T A C G T
A C T G A G T C C G T A A G T C A C T G A G C T A C T G A G C T A T G C A C T G C G A T C G A T C G T A

HES5/MA0821.1/Jaspar

Match Rank:10
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GACGTGCCGT
TGGCACGTGCCG-
 A C G T A C G T A C G T A C T G C T G A A T G C A T C G G C A T A C T G T A G C A G T C A C T G A C G T
G A C T T C A G T C A G A G T C C T G A A G T C C A T G A G C T A C T G A G T C A G T C C T A G A C G T