Information for 1-VNNRGCCGCCATYTTG (Motif 1)

T A G C C T A G A G T C C T A G C T A G G T A C T G A C C A T G A G T C A G T C G T C A A C G T A G C T A G C T A G C T A C T G
Reverse Opposite:
T G A C T C G A C T G A T C G A C G T A A C G T A C T G A C T G G T A C A C T G C A T G G A T C G A T C T C A G A G T C A T C G
p-value:1e-224
log p-value:-5.166e+02
Information Content per bp:1.579
Number of Target Sequences with motif250.0
Percentage of Target Sequences with motif31.81%
Number of Background Sequences with motif864.6
Percentage of Background Sequences with motif1.87%
Average Position of motif in Targets52.0 +/- 18.7bp
Average Position of motif in Background52.7 +/- 33.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.98
Offset:4
Orientation:reverse strand
Alignment:VNNRGCCGCCATYTTG
----GCNGCCATCTTG
 T A G C C T A G A G T C C T A G C T A G G T A C T G A C C A T G A G T C A G T C G T C A A C G T A G C T A G C T A G C T A C T G
A C G T A C G T A C G T A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.94
Offset:4
Orientation:reverse strand
Alignment:VNNRGCCGCCATYTTG
----GCCGCCATCTTG
 T A G C C T A G A G T C C T A G C T A G G T A C T G A C C A T G A G T C A G T C G T C A A C G T A G C T A G C T A G C T A C T G
A C G T A C G T A C G T A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.80
Offset:3
Orientation:forward strand
Alignment:VNNRGCCGCCATYTTG
---GTCCGCCATTA--
 T A G C C T A G A G T C C T A G C T A G G T A C T G A C C A T G A G T C A G T C G T C A A C G T A G C T A G C T A G C T A C T G
A C G T A C G T A C G T C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.65
Offset:7
Orientation:forward strand
Alignment:VNNRGCCGCCATYTTG-
-------GCCATCTGTT
 T A G C C T A G A G T C C T A G C T A G G T A C T G A C C A T G A G T C A G T C G T C A A C G T A G C T A G C T A G C T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

E2F2/MA0864.1/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-VNNRGCCGCCATYTTG
AAAATGGCGCCATTTT-
 A C G T T A G C C T A G A G T C C T A G C T A G G T A C T G A C C A T G A G T C A G T C G T C A A C G T A G C T A G C T A G C T A C T G
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C T A G C G C T A G C A T C G A T C G A T C G A T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:6
Score:0.63
Offset:8
Orientation:forward strand
Alignment:VNNRGCCGCCATYTTG
--------CCTTTGTT
 T A G C C T A G A G T C C T A G C T A G G T A C T G A C C A T G A G T C A G T C G T C A A C G T A G C T A G C T A G C T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

E2F3/MA0469.2/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--VNNRGCCGCCATYTTG
AAAAATGGCGCCATTTTT
 A C G T A C G T T A G C C T A G A G T C C T A G C T A G G T A C T G A C C A T G A G T C A G T C G T C A A C G T A G C T A G C T A G C T A C T G
T C G A T C G A C G T A G C T A C G T A C A G T A T C G A C T G A T G C A C T G A T G C T A G C G T C A G C A T C G A T G C A T A G C T G A C T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.63
Offset:8
Orientation:forward strand
Alignment:VNNRGCCGCCATYTTG--
--------CCATTGTTYB
 T A G C C T A G A G T C C T A G C T A G G T A C T G A C C A T G A G T C A G T C G T C A A C G T A G C T A G C T A G C T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

PB0132.1_Hbp1_2/Jaspar

Match Rank:9
Score:0.62
Offset:3
Orientation:forward strand
Alignment:VNNRGCCGCCATYTTG----
---TGTTCCCATTGTGTACT
 T A G C C T A G A G T C C T A G C T A G G T A C T G A C C A T G A G T C A G T C G T C A A C G T A G C T A G C T A G C T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:VNNRGCCGCCATYTTG
------TGCCAA----
 T A G C C T A G A G T C C T A G C T A G G T A C T G A C C A T G A G T C A G T C G T C A A C G T A G C T A G C T A G C T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T