Information for 2-GTGTCATGGCGGC (Motif 2)

A T C G A G C T T A C G G A C T T G A C G T C A G C A T A T C G A C T G A G T C T A C G A T C G A T G C
Reverse Opposite:
T A C G T A G C A T G C T C A G T A G C A T G C C G T A C A G T A C T G C T G A A T G C T C G A T A G C
p-value:1e-31
log p-value:-7.206e+01
Information Content per bp:1.648
Number of Target Sequences with motif76.0
Percentage of Target Sequences with motif9.11%
Number of Background Sequences with motif763.7
Percentage of Background Sequences with motif1.67%
Average Position of motif in Targets51.7 +/- 21.0bp
Average Position of motif in Background52.0 +/- 35.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.1/Jaspar

Match Rank:1
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:GTGTCATGGCGGC-
---TAATGGCGGNC
 A T C G A G C T T A C G G A C T T G A C G T C A G C A T A T C G A C T G A G T C T A C G A T C G A T G C A C G T
A C G T A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GTGTCATGGCGGC
-CAAGATGGCGGC
 A T C G A G C T T A C G G A C T T G A C G T C A G C A T A T C G A C T G A G T C T A C G A T C G A T G C
A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTGTCATGGCGGC-
TTGCCATGGCAACN
 A T C G A G C T T A C G G A C T T G A C G T C A G C A T A T C G A C T G A G T C T A C G A T C G A T G C A C G T
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C

YY1/MA0095.2/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GTGTCATGGCGGC
-CAAGATGGCGGC
 A T C G A G C T T A C G G A C T T G A C G T C A G C A T A T C G A C T G A G T C T A C G A T C G A T G C
A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

PB0113.1_E2F3_2/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GTGTCATGGCGGC-----
-NNNNTTGGCGCCGANNN
 A T C G A G C T T A C G G A C T T G A C G T C A G C A T A T C G A C T G A G T C T A C G A T C G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GTGTCATGGCGGC
--GTCATN-----
 A T C G A G C T T A C G G A C T T G A C G T C A G C A T A T C G A C T G A G T C T A C G A T C G A T G C
A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T A C G T

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTGTCATGGCGGC-
TTGCCATGGCAACC
 A T C G A G C T T A C G G A C T T G A C G T C A G C A T A T C G A C T G A G T C T A C G A T C G A T G C A C G T
A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C

PB0112.1_E2F2_2/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GTGTCATGGCGGC-----
-NNNNTTGGCGCCGANNN
 A T C G A G C T T A C G G A C T T G A C G T C A G C A T A T C G A C T G A G T C T A C G A T C G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

Rfx1/MA0509.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GTGTCATGGCGGC
GTTGCCATGGCAAC
 A C G T A T C G A G C T T A C G G A C T T G A C G T C A G C A T A T C G A C T G A G T C T A C G A T C G A T G C
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C

Pax2/MA0067.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GTGTCATGGCGGC
-AGTCACGC----
 A T C G A G C T T A C G G A C T T G A C G T C A G C A T A T C G A C T G A G T C T A C G A T C G A T G C
A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T A C G T