Information for 12-TAACCAGCAG (Motif 19)

A G C T C G T A T C G A G A T C A T G C C T G A A T C G G T A C C G T A A C T G
Reverse Opposite:
A G T C C G A T A C T G T A G C A G C T A T C G C T A G A G C T C G A T C T G A
p-value:1e-9
log p-value:-2.205e+01
Information Content per bp:1.830
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.78%
Number of Background Sequences with motif99.2
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets49.4 +/- 29.8bp
Average Position of motif in Background50.9 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TAACCAGCAG
--ANCAGCTG
 A G C T C G T A T C G A G A T C A T G C C T G A A T C G G T A C C G T A A C T G
A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TAACCAGCAG-
-NAHCAGCTGD
 A G C T C G T A T C G A G A T C A T G C C T G A A T C G G T A C C G T A A C T G A C G T
A C G T G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TAACCAGCAG----
--CACAGCAGGGGG
 A G C T C G T A T C G A G A T C A T G C C T G A A T C G G T A C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Foxo1/MA0480.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TAACCAGCAG
TGTAAACAGGA-
 A C G T A C G T A G C T C G T A T C G A G A T C A T G C C T G A A T C G G T A C C G T A A C T G
C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A T C A G T A C G G T C A A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TAACCAGCAG-
-NAACAGCTGG
 A G C T C G T A T C G A G A T C A T G C C T G A A T C G G T A C C G T A A C T G A C G T
A C G T C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G

HMBOX1/MA0895.1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TAACCAGCAG
GTTAACTAGN--
 A C G T A C G T A G C T C G T A T C G A G A T C A T G C C T G A A T C G G T A C C G T A A C T G
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T A C G T

TFAP4/MA0691.1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TAACCAGCAG--
--AACAGCTGAT
 A G C T C G T A T C G A G A T C A T G C C T G A A T C G G T A C C G T A A C T G A C G T A C G T
A C G T A C G T T G C A G C T A A G T C G T C A A T C G T A G C G A C T A T C G C G T A A G C T

PH0168.1_Hnf1b/Jaspar

Match Rank:8
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------TAACCAGCAG-
AGCTGTTAACTAGCCGT
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G T A T C G A G A T C A T G C C T G A A T C G G T A C C G T A A C T G A C G T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TAACCAGCAG---
---NCAGCTGCTG
 A G C T C G T A T C G A G A T C A T G C C T G A A T C G G T A C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

PH0040.1_Hmbox1/Jaspar

Match Rank:10
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TAACCAGCAG--
GANGTTAACTAGTTTNN
 A C G T A C G T A C G T A C G T A C G T A G C T C G T A T C G A G A T C A T G C C T G A A T C G G T A C C G T A A C T G A C G T A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C