Information for 3-CGCGCSCCWGBCCCCK (Motif 11)

A G T C A C T G A G T C A T C G T A G C T A G C A T G C G T A C C G T A A C T G A G C T A T G C G A T C A G T C G A T C C A G T
Reverse Opposite:
G T A C C A T G T C A G C T A G A T C G T C G A T G A C G C A T A C T G T A C G A T C G A T C G A T G C C T A G T G A C C T A G
p-value:1e-13
log p-value:-3.038e+01
Information Content per bp:1.630
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif5.11%
Number of Background Sequences with motif626.0
Percentage of Background Sequences with motif1.36%
Average Position of motif in Targets51.8 +/- 23.9bp
Average Position of motif in Background47.4 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PLAG1/MA0163.1/Jaspar

Match Rank:1
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CGCGCSCCWGBCCCCK
-CCCCCTTGGGCCCC-
 A G T C A C T G A G T C A T C G T A G C T A G C A T G C G T A C C G T A A C T G A G C T A T G C G A T C A G T C G A T C C A G T
A C G T A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:2
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CGCGCSCCWGBCCCCK
GGTCCCGCCCCCTTCTC----
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C A T C G T A G C T A G C A T G C G T A C C G T A A C T G A G C T A T G C G A T C A G T C G A T C C A G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T A C G T A C G T A C G T

PB0095.1_Zfp161_1/Jaspar

Match Rank:3
Score:0.52
Offset:-7
Orientation:reverse strand
Alignment:-------CGCGCSCCWGBCCCCK
NCANGCGCGCGCGCCA-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C A T C G T A G C T A G C A T G C G T A C C G T A A C T G A G C T A T G C G A T C A G T C G A T C C A G T
G C A T G A T C C T G A C T A G C T A G G A T C T C A G G A T C C T A G A G T C C T A G A G T C T A C G G A T C G A T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:4
Score:0.51
Offset:4
Orientation:forward strand
Alignment:CGCGCSCCWGBCCCCK--
----CCCCCGCCCCCGCC
 A G T C A C T G A G T C A T C G T A G C T A G C A T G C G T A C C G T A A C T G A G C T A T G C G A T C A G T C G A T C C A G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:5
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CGCGCSCCWGBCCCCK
ATTTCCCAGVAKSCY---
 A C G T A C G T A G T C A C T G A G T C A T C G T A G C T A G C A T G C G T A C C G T A A C T G A G C T A T G C G A T C A G T C G A T C C A G T
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---CGCGCSCCWGBCCCCK
TACGCCCCGCCACTCTG--
 A C G T A C G T A C G T A G T C A C T G A G T C A T C G T A G C T A G C A T G C G T A C C G T A A C T G A G C T A T G C G A T C A G T C G A T C C A G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:7
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CGCGCSCCWGBCCCCK
--CGCCTCAGGCA---
 A G T C A C T G A G T C A T C G T A G C T A G C A T G C G T A C C G T A A C T G A G C T A T G C G A T C A G T C G A T C C A G T
A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:8
Score:0.50
Offset:3
Orientation:forward strand
Alignment:CGCGCSCCWGBCCCCK
---GGCCCCGCCCCC-
 A G T C A C T G A G T C A T C G T A G C T A G C A T G C G T A C C G T A A C T G A G C T A T G C G A T C A G T C G A T C C A G T
A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T

MZF1/MA0056.1/Jaspar

Match Rank:9
Score:0.49
Offset:10
Orientation:reverse strand
Alignment:CGCGCSCCWGBCCCCK
----------TCCCCA
 A G T C A C T G A G T C A T C G T A G C T A G C A T G C G T A C C G T A A C T G A G C T A T G C G A T C A G T C G A T C C A G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.49
Offset:-4
Orientation:reverse strand
Alignment:----CGCGCSCCWGBCCCCK
GCCMCGCCCMCY--------
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C A T C G T A G C T A G C A T G C G T A C C G T A A C T G A G C T A T G C G A T C A G T C G A T C C A G T
T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T