Information for 1-SWCTGAAASTGAAACT (Motif 2)

A T C G C G T A A G T C C A G T C T A G T C G A C G T A G C T A A T C G G A C T C T A G C T G A T C G A C G T A T A G C G A C T
Reverse Opposite:
C G T A A T C G C G A T A G C T G A C T A G T C C T G A T A G C C G A T G C A T A G C T G A T C G T C A T C A G G C A T T A G C
p-value:1e-24
log p-value:-5.722e+01
Information Content per bp:1.589
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif5.97%
Number of Background Sequences with motif437.0
Percentage of Background Sequences with motif0.96%
Average Position of motif in Targets51.0 +/- 22.5bp
Average Position of motif in Background48.3 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.84
Offset:4
Orientation:reverse strand
Alignment:SWCTGAAASTGAAACT
----GAAACTGAAACT
 A T C G C G T A A G T C C A G T C T A G T C G A C G T A G C T A A T C G G A C T C T A G C T G A T C G A C G T A T A G C G A C T
A C G T A C G T A C G T A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:2
Score:0.83
Offset:4
Orientation:forward strand
Alignment:SWCTGAAASTGAAACT
----GAAAGTGAAAGT
 A T C G C G T A A G T C C A G T C T A G T C G A C G T A G C T A A T C G G A C T C T A G C T G A T C G A C G T A T A G C G A C T
A C G T A C G T A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:3
Score:0.82
Offset:4
Orientation:forward strand
Alignment:SWCTGAAASTGAAACT
----GRAASTGAAAST
 A T C G C G T A A G T C C A G T C T A G T C G A C G T A G C T A A T C G G A C T C T A G C T G A T C G A C G T A T A G C G A C T
A C G T A C G T A C G T A C G T T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:4
Score:0.81
Offset:4
Orientation:reverse strand
Alignment:SWCTGAAASTGAAACT
----GAAAMTGAAACT
 A T C G C G T A A G T C C A G T C T A G T C G A C G T A G C T A A T C G G A C T C T A G C T G A T C G A C G T A T A G C G A C T
A C G T A C G T A C G T A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:5
Score:0.80
Offset:4
Orientation:forward strand
Alignment:SWCTGAAASTGAAACT
----GAAASYGAAASY
 A T C G C G T A A G T C C A G T C T A G T C G A C G T A G C T A A T C G G A C T C T A G C T G A T C G A C G T A T A G C G A C T
A C G T A C G T A C G T A C G T C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:6
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-SWCTGAAASTGAAACT-
WNAGTCADAVTGAAACTN
 A C G T A T C G C G T A A G T C C A G T C T A G T C G A C G T A G C T A A T C G G A C T C T A G C T G A T C G A C G T A T A G C G A C T A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

IRF1/MA0050.2/Jaspar

Match Rank:7
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-SWCTGAAASTGAAACT----
AAANNGAAAGTGAAAGTAAAN
 A C G T A T C G C G T A A G T C C A G T C T A G T C G A C G T A G C T A A T C G G A C T C T A G C T G A T C G A C G T A T A G C G A C T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

PRDM1/MA0508.1/Jaspar

Match Rank:8
Score:0.79
Offset:3
Orientation:forward strand
Alignment:SWCTGAAASTGAAACT--
---AGAAAGTGAAAGTGA
 A T C G C G T A A G T C C A G T C T A G T C G A C G T A G C T A A T C G G A C T C T A G C T G A T C G A C G T A T A G C G A C T A C G T A C G T
A C G T A C G T A C G T C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:9
Score:0.78
Offset:4
Orientation:forward strand
Alignment:SWCTGAAASTGAAACT
----GGAAGTGAAAST
 A T C G C G T A A G T C C A G T C T A G T C G A C G T A G C T A A T C G G A C T C T A G C T G A T C G A C G T A T A G C G A C T
A C G T A C G T A C G T A C G T C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:10
Score:0.78
Offset:3
Orientation:reverse strand
Alignment:SWCTGAAASTGAAACT--
---GGAAANTGAAACTNA
 A T C G C G T A A G T C C A G T C T A G T C G A C G T A G C T A A T C G G A C T C T A G C T G A T C G A C G T A T A G C G A C T A C G T A C G T
A C G T A C G T A C G T T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A