Information for 21-GTTTGCCTGG (Motif 29)

A C T G A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A C T G A C T G A G T C C G T A C G T A C G T A A G T C
p-value:1e-6
log p-value:-1.590e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets30.5 +/- 13.4bp
Average Position of motif in Background56.6 +/- 16.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GTTTGCCTGG
NNACTTGCCTT-
 A C G T A C G T A C T G A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C T G A C T G
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GTTTGCCTGG
--TWGTCTGV
 A C T G A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C T G A C T G
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GTTTGCCTGG
CTGTTCCTGG
 A C T G A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C T G A C T G
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GTTTGCCTGG--
GGGGCTYGKCTGGGA
 A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C T G A C T G A C G T A C G T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTTTGCCTGG
RYHYACCTGB
 A C T G A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C T G A C T G
T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------GTTTGCCTGG
NNNNTTGTGTGCTTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C T G A C T G
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GTTTGCCTGG
--CTGTCTGG
 A C T G A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C T G A C T G
A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GTTTGCCTGG--
--TTGCGTGCVA
 A C T G A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GTTTGCCTGG---
GGTTGCCATGGCAA
 A C G T A C T G A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C T G A C T G A C G T A C G T A C G T
C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GTTTGCCTGG-------
--TTTCCTGGAAAGNNN
 A C T G A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A