Information for 10-CGTCBCTATGGTT (Motif 15)

A G T C T C A G A C G T A G T C A T C G A T G C C A G T C G T A C G A T A C T G A C T G A G C T A C G T
Reverse Opposite:
G T C A T C G A A G T C A G T C C G T A C G A T G C T A A T C G T A C G A C T G C G T A A G T C A C T G
p-value:1e-12
log p-value:-2.876e+01
Information Content per bp:1.765
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.9 +/- 14.3bp
Average Position of motif in Background46.5 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0055.1_Rfx4_1/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CGTCBCTATGGTT
NNCGTTGCTATGGNN
 A C G T A C G T A G T C T C A G A C G T A G T C A T C G A T G C C A G T C G T A C G A T A C T G A C T G A G C T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

PB0054.1_Rfx3_1/Jaspar

Match Rank:2
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------CGTCBCTATGGTT----
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C T C A G A C G T A G T C A T C G A T G C C A G T C G T A C G A T A C T G A C T G A G C T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CGTCBCTATGGTT
NCCGTTGCTANGNGN
 A C G T A C G T A G T C T C A G A C G T A G T C A T C G A T G C C A G T C G T A C G A T A C T G A C T G A G C T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

RFX4/MA0799.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CGTCBCTATGGTT---
CGTTGCCATGGCAACG
 A G T C T C A G A C G T A G T C A T C G A T G C C A G T C G T A C G A T A C T G A C T G A G C T A C G T A C G T A C G T A C G T
A T G C C T A G G C A T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A T C G A G A T C T A C G

RFX3/MA0798.1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CGTCBCTATGGTT---
CGTTGCCATGGCAACN
 A G T C T C A G A C G T A G T C A T C G A T G C C A G T C G T A C G A T A C T G A C T G A G C T A C G T A C G T A C G T A C G T
A T G C C T A G A G C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C T G A G A T C T A C G

Rfx1/MA0509.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CGTCBCTATGGTT--
-GTTGCCATGGNAAC
 A G T C T C A G A C G T A G T C A T C G A T G C C A G T C G T A C G A T A C T G A C T G A G C T A C G T A C G T A C G T
A C G T A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CGTCBCTATGGTT-
----GCTGTGGTTT
 A G T C T C A G A C G T A G T C A T C G A T G C C A G T C G T A C G A T A C T G A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CGTCBCTATGGTT-
---GTCTGTGGTTT
 A G T C T C A G A C G T A G T C A T C G A T G C C A G T C G T A C G A T A C T G A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CGTCBCTATGGTT-
NGTTGCCATGGCAA
 A G T C T C A G A C G T A G T C A T C G A T G C C A G T C G T A C G A T A C T G A C T G A G C T A C G T A C G T
A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CGTCBCTATGGTT
NGTCCCNNGGGA-
 A G T C T C A G A C G T A G T C A T C G A T G C C A G T C G T A C G A T A C T G A C T G A G C T A C G T
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T