Information for 4-YAAAACTTSAAGT (Motif 5)

A G C T C G T A C G T A C G T A C G T A A G T C A C G T A C G T A T G C C G T A C G T A A C T G A C G T
Reverse Opposite:
C G T A G T A C A C G T A C G T A T C G C G T A C G T A A C T G A C G T A C G T A C G T A C G T C T G A
p-value:1e-13
log p-value:-3.078e+01
Information Content per bp:1.923
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.1 +/- 25.4bp
Average Position of motif in Background82.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0114.1_Nkx2-5/Jaspar

Match Rank:1
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:YAAAACTTSAAGT------
---AAATTCAAGTGGNTTN
 A G C T C G T A C G T A C G T A C G T A A G T C A C G T A C G T A T G C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

PH0171.1_Nkx2-1/Jaspar

Match Rank:2
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:YAAAACTTSAAGT------
---AANTTCAAGTGGCTTN
 A G C T C G T A C G T A C G T A C G T A A G T C A C G T A C G T A T G C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

PH0113.1_Nkx2-4/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:YAAAACTTSAAGT------
---AATTTCAAGTGGCTTN
 A G C T C G T A C G T A C G T A C G T A A G T C A C G T A C G T A T G C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A

NKX2-8/MA0673.1/Jaspar

Match Rank:4
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:YAAAACTTSAAGT--
------NTCAAGTGG
 A G C T C G T A C G T A C G T A C G T A A G T C A C G T A C G T A T G C C G T A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

PH0111.1_Nkx2-2/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:YAAAACTTSAAGT------
--NANTTTCAAGTGGTTAN
 A G C T C G T A C G T A C G T A C G T A A G T C A C G T A C G T A T G C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

SPI1/MA0080.4/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:YAAAACTTSAAGT-
AAAAAGCGGAAGTA
 A G C T C G T A C G T A C G T A C G T A A G T C A C G T A C G T A T G C C G T A C G T A A C T G A C G T A C G T
T C G A C T G A C G T A C G T A C G T A T A C G T G A C C T A G A T C G G T C A C G T A A T C G G A C T C G T A

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:YAAAACTTSAAGT
-GAAAGTGAAAGT
 A G C T C G T A C G T A C G T A C G T A A G T C A C G T A C G T A T G C C G T A C G T A A C T G A C G T
A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

SPIC/MA0687.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:YAAAACTTSAAGT-
AAAAAGAGGAAGTA
 A G C T C G T A C G T A C G T A C G T A A G T C A C G T A C G T A T G C C G T A C G T A A C T G A C G T A C G T
G T C A C T G A G T C A G T C A C G T A T A C G T G C A A T C G C A T G G C T A T G C A C T A G G C A T G T C A

PH0115.1_Nkx2-6/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:YAAAACTTSAAGT------
---AATNTTAAGTGGNTNN
 A G C T C G T A C G T A C G T A C G T A A G T C A C G T A C G T A T G C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A

SOX4/MA0867.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:YAAAACTTSAAGT----
-AACACTGCAATTGTTC
 A G C T C G T A C G T A C G T A C G T A A G T C A C G T A C G T A T G C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C T G A A G T C G T C A G T A C A G C T A C T G G T A C G T C A G T C A G A C T A G C T A C T G A G C T A C G T G A T C