Information for 8-GAAATTAGTCASN (Motif 13)

A C T G G C T A C G T A C G T A A C G T A C G T C G T A A C T G A C G T A G T C C G T A A T C G A G C T
Reverse Opposite:
C T A G A T G C A C G T A C T G C G T A A G T C A C G T C G T A C G T A C G A T C G A T C G A T A G T C
p-value:1e-10
log p-value:-2.422e+01
Information Content per bp:1.843
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.8 +/- 24.0bp
Average Position of motif in Background61.7 +/- 11.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:1
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:GAAATTAGTCASN--
NNAATTAGTCACGGT
 A C T G G C T A C G T A C G T A A C G T A C G T C G T A A C T G A C G T A G T C C G T A A T C G A G C T A C G T A C G T
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T

BATF::JUN/MA0462.1/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GAAATTAGTCASN
GAAATGACTCA--
 A C T G G C T A C G T A C G T A A C G T A C G T C G T A A C T G A C G T A G T C C G T A A T C G A G C T
C T A G C T G A C G T A G T C A A C G T A C T G C G T A T A G C A C G T T G A C C G T A A C G T A C G T

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:3
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GAAATTAGTCASN
-NNATGASTCATH
 A C T G G C T A C G T A C G T A A C G T A C G T C G T A A C T G A C G T A G T C C G T A A T C G A G C T
A C G T A C T G C T A G T C G A C G A T C A T G G C T A A T C G C G A T G T A C G C T A A G C T G T A C

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:4
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GAAATTAGTCASN
RGCCATYAATCA--
 A C G T A C T G G C T A C G T A C G T A A C G T A C G T C G T A A C T G A C G T A G T C C G T A A T C G A G C T
C T A G T A C G G A T C T G A C T C G A A C G T G A C T G C T A T C G A A G C T G A T C G C T A A C G T A C G T

FOS/MA0476.1/Jaspar

Match Rank:5
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GAAATTAGTCASN
--NATGAGTCANN
 A C T G G C T A C G T A C G T A A C G T A C G T C G T A A C T G A C G T A G T C C G T A A T C G A G C T
A C G T A C G T T C G A T C G A A C G T A C T G C G T A T A C G A C G T G T A C C G T A A T G C G T C A

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:6
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GAAATTAGTCASN
--DATGASTCAT-
 A C T G G C T A C G T A C G T A A C G T A C G T C G T A A C T G A C G T A G T C C G T A A T C G A G C T
A C G T A C G T C A G T T G C A A C G T A C T G C G T A A T C G C G A T T G A C C G T A A C G T A C G T

Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer

Match Rank:7
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GAAATTAGTCASN-
--NATGASTCABNN
 A C T G G C T A C G T A C G T A A C G T A C G T C G T A A C T G A C G T A G T C C G T A A T C G A G C T A C G T
A C G T A C G T C T A G T C G A C G A T A C T G C G T A T A C G A G C T T G A C G C T A A C G T G A T C T A G C

JUND/MA0491.1/Jaspar

Match Rank:8
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GAAATTAGTCASN
--NATGAGTCACN
 A C T G G C T A C G T A C G T A A C G T A C G T C G T A A C T G A C G T A G T C C G T A A T C G A G C T
A C G T A C G T A T C G T C G A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G T C G A T C

PH0132.1_Pax6/Jaspar

Match Rank:9
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----GAAATTAGTCASN
GNNAATTAATTAATCA--
 A C G T A C G T A C G T A C G T A C G T A C T G G C T A C G T A C G T A A C G T A C G T C G T A A C T G A C G T A G T C C G T A A T C G A G C T
C A T G G C A T A T G C T G C A T G C A G A C T G C A T T C G A G C T A C G A T A C G T C G T A C T G A A C G T G A T C T C G A A C G T A C G T

JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer

Match Rank:10
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GAAATTAGTCASN
---ATGASTCATY
 A C T G G C T A C G T A C G T A A C G T A C G T C G T A A C T G A C G T A G T C C G T A A T C G A G C T
A C G T A C G T A C G T T C G A G A C T C A T G G C T A A T C G C G A T G T A C C G T A A G C T G A T C