Information for 6-AAAAAAGAGACCG (Motif 10)

G C T A C T G A C G T A C G T A G T C A C G T A A C T G C G T A A C T G G C T A A G T C A G T C A T C G
Reverse Opposite:
A T G C A C T G A C T G C A G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A G C T C A G T
p-value:1e-10
log p-value:-2.459e+01
Information Content per bp:1.928
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif11.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets47.9 +/- 23.0bp
Average Position of motif in Background55.0 +/- 35.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0033.1_Irf3_1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AAAAAAGAGACCG
GAGAACCGAAACTG
 A C G T G C T A C T G A C G T A C G T A G T C A C G T A A C T G C G T A A C T G G C T A A G T C A G T C A T C G
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:2
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------AAAAAAGAGACCG
TACTGGAAAAAAAA-----
 A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A C G T A C G T A G T C A C G T A A C T G C G T A A C T G G C T A A G T C A G T C A T C G
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T A C G T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AAAAAAGAGACCG
GAAAMTGAAACT-
 G C T A C T G A C G T A C G T A G T C A C G T A A C T G C G T A A C T G G C T A A G T C A G T C A T C G
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AAAAAAGAGACCG-
GGAAANTGAAACTNA
 A C G T G C T A C T G A C G T A C G T A G T C A C G T A A C T G C G T A A C T G G C T A A G T C A G T C A T C G A C G T
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

MEF2C/MA0497.1/Jaspar

Match Rank:5
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----AAAAAAGAGACCG
ATGCTAAAAATAGAA--
 A C G T A C G T A C G T A C G T G C T A C T G A C G T A C G T A G T C A C G T A A C T G C G T A A C T G G C T A A G T C A G T C A T C G
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AAAAAAGAGACCG----
ATAAATGACACCTATCA
 G C T A C T G A C G T A C G T A G T C A C G T A A C T G C G T A A C T G G C T A A G T C A G T C A T C G A C G T A C G T A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AAAAAAGAGACCG
GAAACTGAAACT-
 G C T A C T G A C G T A C G T A G T C A C G T A A C T G C G T A A C T G G C T A A G T C A G T C A T C G
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:8
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----AAAAAAGAGACCG
GTTAAAAAAAAAAATTA-
 A C G T A C G T A C G T A C G T A C G T G C T A C T G A C G T A C G T A G T C A C G T A A C T G C G T A A C T G G C T A A G T C A G T C A T C G
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AAAAAAGAGACCG
-GGTTAGAGACCT
 G C T A C T G A C G T A C G T A G T C A C G T A A C T G C G T A A C T G G C T A A G T C A G T C A T C G
A C G T C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AAAAAAGAGACCG
GAAASYGAAASY-
 G C T A C T G A C G T A C G T A G T C A C G T A A C T G C G T A A C T G G C T A A G T C A G T C A T C G
C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T A C G T