Information for 4-CATGATTGGC (Motif 4)

A G T C T C G A A G C T A C T G G T C A A C G T A C G T A C T G C A T G A G T C
Reverse Opposite:
C T A G G A T C G T A C C G T A C G T A A C G T A G T C T C G A A G C T T C A G
p-value:1e-15
log p-value:-3.656e+01
Information Content per bp:1.844
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif19.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets40.8 +/- 19.7bp
Average Position of motif in Background49.1 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.81
Offset:2
Orientation:reverse strand
Alignment:CATGATTGGC----
--TGATTGGCTANN
 A G T C T C G A A G C T A C T G G T C A A C G T A C G T A C T G C A T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

Dux/MA0611.1/Jaspar

Match Rank:2
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:CATGATTGGC
-TTGATTGN-
 A G T C T C G A A G C T A C T G G T C A A C G T A C G T A C T G C A T G A G T C
A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:CATGATTGGC-
-CCGATTGGCT
 A G T C T C G A A G C T A C T G G T C A A C G T A C G T A C T G C A T G A G T C A C G T
A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

NFYB/MA0502.1/Jaspar

Match Rank:4
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:CATGATTGGC------
-CTGATTGGTCNATTT
 A G T C T C G A A G C T A C T G G T C A A C G T A C G T A C T G C A T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:5
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CATGATTGGC---
-BTGABTGACAGS
 A G T C T C G A A G C T A C T G G T C A A C G T A C G T A C T G C A T G A G T C A C G T A C G T A C G T
A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CATGATTGGC---
-NTGATTGACAGN
 A G T C T C G A A G C T A C T G G T C A A C G T A C G T A C T G C A T G A G T C A C G T A C G T A C G T
A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

NFYA/MA0060.2/Jaspar

Match Rank:7
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----CATGATTGGC---
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C G T A C G T A G T C T C G A A G C T A C T G G T C A A C G T A C G T A C T G C A T G A G T C A C G T A C G T A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.70
Offset:5
Orientation:forward strand
Alignment:CATGATTGGC-
-----TTGGCA
 A G T C T C G A A G C T A C T G G T C A A C G T A C G T A C T G C A T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:CATGATTGGC---
----NTTGGCANN
 A G T C T C G A A G C T A C T G G T C A A C G T A C G T A C T G C A T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

Gfi1/MA0038.1/Jaspar

Match Rank:10
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CATGATTGGC
CNGTGATTTN-
 A C G T A G T C T C G A A G C T A C T G G T C A A C G T A C G T A C T G C A T G A G T C
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T