Information for 5-AGCATTTCCC (Motif 6)

G C T A T C A G G T A C C G T A A C G T A G C T C A G T G A T C G A T C G A T C
Reverse Opposite:
C T A G C T A G C T A G G T C A T C G A T C G A G C A T C A T G A G T C C G A T
p-value:1e-11
log p-value:-2.552e+01
Information Content per bp:1.647
Number of Target Sequences with motif70.0
Percentage of Target Sequences with motif8.04%
Number of Background Sequences with motif1557.8
Percentage of Background Sequences with motif3.23%
Average Position of motif in Targets48.8 +/- 27.3bp
Average Position of motif in Background49.9 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.63
Offset:3
Orientation:forward strand
Alignment:AGCATTTCCC---
---ATTTCCTGTN
 G C T A T C A G G T A C C G T A A C G T A G C T C A G T G A T C G A T C G A T C A C G T A C G T A C G T
A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGCATTTCCC
GGGAATTTCC-
 A C G T G C T A T C A G G T A C C G T A A C G T A G C T C A G T G A T C G A T C G A T C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AGCATTTCCC
GGGAATTTCC-
 A C G T G C T A T C A G G T A C C G T A A C G T A G C T C A G T G A T C G A T C G A T C
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AGCATTTCCC----
--CACTTCCYCTTT
 G C T A T C A G G T A C C G T A A C G T A G C T C A G T G A T C G A T C G A T C A C G T A C G T A C G T A C G T
A C G T A C G T T A G C T C G A A T G C A C G T A C G T A G T C A G T C A G C T G A T C G C A T G A C T G C A T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:AGCATTTCCC---
---HTTTCCCASG
 G C T A T C A G G T A C C G T A A C G T A G C T C A G T G A T C G A T C G A T C A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AGCATTTCCC--
--CACTTCCTCT
 G C T A T C A G G T A C C G T A A C G T A G C T C A G T G A T C G A T C G A T C A C G T A C G T
A C G T A C G T A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AGCATTTCCC----
--VDTTTCCCGCCA
 G C T A T C A G G T A C C G T A A C G T A G C T C A G T G A T C G A T C G A T C A C G T A C G T A C G T A C G T
A C G T A C G T T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGCATTTCCC
NGGGGATTTCCC
 A C G T A C G T G C T A T C A G G T A C C G T A A C G T A G C T C A G T G A T C G A T C G A T C
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

GFY(?)/Promoter/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGCATTTCCC
ACTACAATTCCC
 A C G T A C G T G C T A T C A G G T A C C G T A A C G T A G C T C A G T G A T C G A T C G A T C
T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C

PB0058.1_Sfpi1_1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGCATTTCCC-----
-NNACTTCCTCTTNN
 G C T A T C A G G T A C C G T A A C G T A G C T C A G T G A T C G A T C G A T C A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C T A C T G A A T G C C G A T C G A T A G T C A G T C A C G T A G T C G C A T G C A T G C T A T C G A