Information for 7-YYRTCACAGTTWC (Motif 4)

A G T C A G T C C T G A A C G T A G T C C G T A A G T C G T C A A C T G A G C T A C G T C G T A A G T C
Reverse Opposite:
A C T G C G A T C G T A C T G A A G T C A C G T A C T G A C G T A C T G G T C A A G C T C T A G C T A G
p-value:1e-11
log p-value:-2.655e+01
Information Content per bp:1.870
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.2 +/- 28.1bp
Average Position of motif in Background43.1 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myb/MA0100.2/Jaspar

Match Rank:1
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:YYRTCACAGTTWC
---TGGCAGTTGN
 A G T C A G T C C T G A A C G T A G T C C G T A A G T C G T C A A C T G A G C T A C G T C G T A A G T C
A C G T A C G T A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:2
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:YYRTCACAGTTWC
---BRRCVGTTDN
 A G T C A G T C C T G A A C G T A G T C C G T A A G T C G T C A A C T G A G C T A C G T C G T A A G T C
A C G T A C G T A C G T A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G

PB0159.1_Rfx4_2/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:YYRTCACAGTTWC---
-TACCCTAGTTACCGA
 A G T C A G T C C T G A A C G T A G T C C G T A A G T C G T C A A C T G A G C T A C G T C G T A A G T C A C G T A C G T A C G T
A C G T G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:YYRTCACAGTTWC
----CACAGN---
 A G T C A G T C C T G A A C G T A G T C C G T A A G T C G T C A A C T G A G C T A C G T C G T A A G T C
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:YYRTCACAGTTWC
---TCACACCT--
 A G T C A G T C C T G A A C G T A G T C C G T A A G T C G T C A A C T G A G C T A C G T C G T A A G T C
A C G T A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:YYRTCACAGTTWC
-CTTCACACCTA-
 A G T C A G T C C T G A A C G T A G T C C G T A A G T C G T C A A C T G A G C T A C G T C G T A A G T C
A C G T A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A A C G T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:forward strand
Alignment:YYRTCACAGTTWC
---TGTCGGTT--
 A G T C A G T C C T G A A C G T A G T C C G T A A G T C G T C A A C T G A G C T A C G T C G T A A G T C
A C G T A C G T A C G T C G A T C A T G C G A T G A T C T C A G A T C G G C A T G C A T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:YYRTCACAGTTWC
-KTTCACACCT--
 A G T C A G T C C T G A A C G T A G T C C G T A A G T C G T C A A C T G A G C T A C G T C G T A A G T C
A C G T C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:9
Score:0.59
Offset:3
Orientation:forward strand
Alignment:YYRTCACAGTTWC
---TGGCAGTTGG
 A G T C A G T C C T G A A C G T A G T C C G T A A G T C G T C A A C T G A G C T A C G T C G T A A G T C
A C G T A C G T A C G T G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G

EOMES/MA0800.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-YYRTCACAGTTWC
NTTTTCACACCTT-
 A C G T A G T C A G T C C T G A A C G T A G T C C G T A A G T C G T C A A C T G A G C T A C G T C G T A A G T C
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T A C G T