p-value: | 1e-8 |
log p-value: | -1.955e+01 |
Information Content per bp: | 1.902 |
Number of Target Sequences with motif | 15.0 |
Percentage of Target Sequences with motif | 2.29% |
Number of Background Sequences with motif | 150.5 |
Percentage of Background Sequences with motif | 0.30% |
Average Position of motif in Targets | 55.2 +/- 26.1bp |
Average Position of motif in Background | 51.5 +/- 30.1bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.07 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 1 |
Score: | 0.72 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TTCTGTCTGT --CTGTCTGG |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 2 |
Score: | 0.71 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TTCTGTCTGT----- NNTNNTGTCTGGNNTNG |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 3 |
Score: | 0.68 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TTCTGTCTGT VBSYGTCTGG |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 4 |
Score: | 0.66 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TTCTGTCTGT --TWGTCTGV |
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SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar
Match Rank: | 5 |
Score: | 0.63 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TTCTGTCTGT----- --CTGTCTGTCACCT |
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Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
Match Rank: | 6 |
Score: | 0.61 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TTCTGTCTGT----- ---TGTCTGDCACCT |
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MEIS1/MA0498.2/Jaspar
Match Rank: | 7 |
Score: | 0.60 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TTCTGTCTGT --NTGTCAN- |
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PB0166.1_Sox12_2/Jaspar
Match Rank: | 8 |
Score: | 0.57 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TTCTGTCTGT-- ANTCCTTTGTCTNNNN |
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POL009.1_DCE_S_II/Jaspar
Match Rank: | 9 |
Score: | 0.56 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TTCTGTCTGT -GCTGTG--- |
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MEIS2/MA0774.1/Jaspar
Match Rank: | 10 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TTCTGTCTGT -GCTGTCAA- |
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