Information for 3-AGGCTCGGCC (Motif 12)

C G T A A C T G C A T G A G T C A C G T A G T C C T A G A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C G A T C C T A G T G C A A C T G G T A C A G T C C G A T
p-value:1e-8
log p-value:-2.032e+01
Information Content per bp:1.852
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.90%
Number of Background Sequences with motif243.3
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets50.9 +/- 23.9bp
Average Position of motif in Background50.0 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:AGGCTCGGCC--
--GCTCGGSCTC
 C G T A A C T G C A T G A G T C A C G T A G T C C T A G A C T G A G T C A G T C A C G T A C G T
A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AGGCTCGGCC--
GGGGCCGAGGCCTG
 A C G T A C G T C G T A A C T G C A T G A G T C A C G T A G T C C T A G A C T G A G T C A G T C A C G T A C G T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:AGGCTCGGCC-
---CTAGGCCT
 C G T A A C T G C A T G A G T C A C G T A G T C C T A G A C T G A G T C A G T C A C G T
A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AGGCTCGGCC----
--GCTCCGCCCMCY
 C G T A A C T G C A T G A G T C A C G T A G T C C T A G A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

PB0180.1_Sp4_2/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AGGCTCGGCC--
CAAAGGCGTGGCCAG
 A C G T A C G T A C G T C G T A A C T G C A T G A G T C A C G T A G T C C T A G A C T G A G T C A G T C A C G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

Sp1(Zf)/Promoter/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGGCTCGGCC---
-GGCCCCGCCCCC
 C G T A A C T G C A T G A G T C A C G T A G T C C T A G A C T G A G T C A G T C A C G T A C G T A C G T
A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AGGCTCGGCC-
---CNAGGCCT
 C G T A A C T G C A T G A G T C A C G T A G T C C T A G A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGGCTCGGCC----
NAGCCCCGCCCCCN
 C G T A A C T G C A T G A G T C A C G T A G T C C T A G A C T G A G T C A G T C A C G T A C G T A C G T A C G T
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGGCTCGGCC
WDNCTGGGCA
 C G T A A C T G C A T G A G T C A C G T A G T C C T A G A C T G A G T C A G T C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

SP4/MA0685.1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGGCTCGGCC-----
TAAGCCACGCCCCCTTT
 A C G T A C G T C G T A A C T G C A T G A G T C A C G T A G T C C T A G A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T