Information for 2-CAACASACAAAAT (Motif 5)

G T A C C G T A C G T A G T A C C G T A A T G C G T C A A G T C G C T A C G T A C G T A C G T A C A G T
Reverse Opposite:
G T C A A C G T A C G T A C G T C G A T C T A G A C G T A T C G C G A T A C T G A C G T A C G T A C T G
p-value:1e-11
log p-value:-2.555e+01
Information Content per bp:1.794
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif21.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets50.5 +/- 26.2bp
Average Position of motif in Background49.9 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf7/MA0769.1/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CAACASACAAAAT-
--AAAGATCAAAGG
 G T A C C G T A C G T A G T A C C G T A A T G C G T C A A G T C G C T A C G T A C G T A C G T A C A G T A C G T
A C G T A C G T C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G

PB0166.1_Sox12_2/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CAACASACAAAAT---
AAACAGACAAAGGAAT
 G T A C C G T A C G T A G T A C C G T A A T G C G T C A A G T C G C T A C G T A C G T A C G T A C A G T A C G T A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

LEF1/MA0768.1/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CAACASACAAAAT----
--AAAGATCAAAGGGTT
 G T A C C G T A C G T A G T A C C G T A A T G C G T C A A G T C G C T A C G T A C G T A C G T A C A G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

TCF7L2/MA0523.1/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CAACASACAAAAT---
--AAAGATCAAAGGAA
 G T A C C G T A C G T A G T A C C G T A A T G C G T C A A G T C G C T A C G T A C G T A C G T A C A G T A C G T A C G T A C G T
A C G T A C G T C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

PB0208.1_Zscan4_2/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAACASACAAAAT-
CGAAGCACACAAAATA
 A C G T A C G T G T A C C G T A C G T A G T A C C G T A A T G C G T C A A G T C G C T A C G T A C G T A C G T A C A G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:6
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CAACASACAAAAT---
----ACATCAAAGGNA
 G T A C C G T A C G T A G T A C C G T A A T G C G T C A A G T C G C T A C G T A C G T A C G T A C A G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

POL007.1_BREd/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CAACASACAAAAT
-NANANAC-----
 G T A C C G T A C G T A G T A C C G T A A T G C G T C A A G T C G C T A C G T A C G T A C G T A C A G T
A C G T T G C A T G C A T G A C T G C A G T C A T C G A G A T C A C G T A C G T A C G T A C G T A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CAACASACAAAAT-----
-NNNAGATCAAAGGANNN
 G T A C C G T A C G T A G T A C C G T A A T G C G T C A A G T C G C T A C G T A C G T A C G T A C A G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0040.1_Lef1_1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CAACASACAAAAT-----
-NANAGATCAAAGGGNNN
 G T A C C G T A C G T A G T A C C G T A A T G C G T C A A G T C G C T A C G T A C G T A C G T A C A G T A C G T A C G T A C G T A C G T A C G T
A C G T A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

PB0148.1_Mtf1_2/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CAACASACAAAAT---
--AAATAAGAAAAAAC
 G T A C C G T A C G T A G T A C C G T A A T G C G T C A A G T C G C T A C G T A C G T A C G T A C A G T A C G T A C G T A C G T
A C G T A C G T G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C