Information for 7-CCGCTGCTGA (Motif 18)

A T G C G T A C A T C G G A T C G C A T C A T G A G T C A G C T A T C G T G C A
Reverse Opposite:
A C G T T A G C T C G A T C A G G T A C C G T A C T A G T A G C C A T G T A C G
p-value:1e-6
log p-value:-1.454e+01
Information Content per bp:1.527
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.88%
Number of Background Sequences with motif412.0
Percentage of Background Sequences with motif0.86%
Average Position of motif in Targets51.1 +/- 24.4bp
Average Position of motif in Background49.9 +/- 33.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-CCGCTGCTGA
NCAGCTGCTG-
 A C G T A T G C G T A C A T C G G A T C G C A T C A T G A G T C A G C T A T C G T G C A
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:2
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--CCGCTGCTGA
AGCAGCTGCTNN
 A C G T A C G T A T G C G T A C A T C G G A T C G C A T C A T G A G T C A G C T A T C G T G C A
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

Ascl2/MA0816.1/Jaspar

Match Rank:3
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--CCGCTGCTGA
AGCAGCTGCT--
 A C G T A C G T A T G C G T A C A T C G G A T C G C A T C A T G A G T C A G C T A T C G T G C A
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-CCGCTGCTGA-
CCCCCTGCTGTG
 A C G T A T G C G T A C A T C G G A T C G C A T C A T G A G T C A G C T A T C G T G C A A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.73
Offset:1
Orientation:forward strand
Alignment:CCGCTGCTGA
-ANCAGCTG-
 A T G C G T A C A T C G G A T C G C A T C A T G A G T C A G C T A T C G T G C A
A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:6
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----CCGCTGCTGA--
CTCAGCAGCTGCTACTG
 A C G T A C G T A C G T A C G T A C G T A T G C G T A C A T C G G A T C G C A T C A T G A G T C A G C T A T C G T G C A A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:7
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CCGCTGCTGA
CAGCTGTT--
 A T G C G T A C A T C G G A T C G C A T C A T G A G T C A G C T A T C G T G C A
A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:8
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---CCGCTGCTGA
NNGCAGCTGTC--
 A C G T A C G T A C G T A T G C G T A C A T C G G A T C G C A T C A T G A G T C A G C T A T C G T G C A
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:9
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---CCGCTGCTGA
NNGCAGCTGTT--
 A C G T A C G T A C G T A T G C G T A C A T C G G A T C G C A T C A T G A G T C A G C T A T C G T G C A
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---CCGCTGCTGA--
GGCCYCCTGCTGDGH
 A C G T A C G T A C G T A T G C G T A C A T C G G A T C G C A T C A T G A G T C A G C T A T C G T G C A A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C