Information for 1-GGAGTCTGGT (Motif 14)

A C T G A T C G C T G A A C T G A C G T A T G C A G C T A C T G A C T G A C G T
Reverse Opposite:
G T C A A G T C A G T C C T G A A T C G G T C A T G A C A G C T A T G C A G T C
p-value:1e-9
log p-value:-2.166e+01
Information Content per bp:1.844
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.74%
Number of Background Sequences with motif197.6
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets62.4 +/- 26.7bp
Average Position of motif in Background49.9 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0203.1_Zfp691_2/Jaspar

Match Rank:1
Score:0.78
Offset:-6
Orientation:reverse strand
Alignment:------GGAGTCTGGT-
NTNNNAGGAGTCTCNTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T C G C T G A A C T G A C G T A T G C A G C T A C T G A C T G A C G T A C G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GGAGTCTGGT
VBSYGTCTGG-
 A C G T A C T G A T C G C T G A A C T G A C G T A T G C A G C T A C T G A C T G A C G T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GGAGTCTGGT
-CTGTCTGG-
 A C T G A T C G C T G A A C T G A C G T A T G C A G C T A C T G A C T G A C G T
A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GGAGTCTGGT--
--GGTCTGGCAT
 A C T G A T C G C T G A A C T G A C G T A T G C A G C T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GGAGTCTGGT----
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C T G A T C G C T G A A C T G A C G T A T G C A G C T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GGAGTCTGGT
-TWGTCTGV-
 A C T G A T C G C T G A A C T G A C G T A T G C A G C T A C T G A C T G A C G T
A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GGAGTCTGGT---
-NNHTGTGGTTWN
 A C T G A T C G C T G A A C T G A C G T A T G C A G C T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

GLI2/MA0734.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GGAGTCTGGT---
-CAGTGTGGTCGC
 A C T G A T C G C T G A A C T G A C G T A T G C A G C T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGAGTCTGGT----
RGSMTBCTGGGAAAT
 A C G T A C T G A T C G C T G A A C T G A C G T A T G C A G C T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GGAGTCTGGT---
---CTGTGGTTTN
 A C T G A T C G C T G A A C T G A C G T A T G C A G C T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G