Information for 17-TGAGTTTTTGGAC (Motif 35)

A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A G T C C G T A C G T A C G T A C G T A C G T A A G T C A C G T A G T C C G T A
p-value:1e-5
log p-value:-1.236e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.0 +/- 21.9bp
Average Position of motif in Background63.7 +/- 9.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rarg/MA0859.1/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGAGTTTTTGGAC--
TTGACCTTTTGACCTT
 A C G T A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C G T
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T

Nr2e1/MA0676.1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGAGTTTTTGGAC
TTGACTTTT-----
 A C G T A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A G T C
C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T

Rarb/MA0857.1/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGAGTTTTTGGAC---
TGACCTTTTGACCTTT
 A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C G T
G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T

HOXD12/MA0873.1/Jaspar

Match Rank:4
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TGAGTTTTTGGAC-
---NTTTTACGACT
 A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A G T C A C G T
A C G T A C G T A C G T C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T

Hoxa11/MA0911.1/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TGAGTTTTTGGAC-
--ANTTTTACGACC
 A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A G T C A C G T
A C G T A C G T G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C

PH0047.1_Hoxa11/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TGAGTTTTTGGAC----
-NNGTTTTACGACTTTA
 A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C G T A C G T
A C G T G T C A G A C T C T A G C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C G T A

HOXC12/MA0906.1/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TGAGTTTTTGGAC-
---NTTTTACGACC
 A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A G T C A C G T
A C G T A C G T A C G T C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C

PH0065.1_Hoxc10/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TGAGTTTTTGGAC----
-ANNTTTTACGACNTNN
 A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C G T A C G T
A C G T T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A

PH0076.1_Hoxd11/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGAGTTTTTGGAC----
ANNATTTTACGACNTNA
 A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C G T A C G T
G T C A C T A G C T A G C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T G A

RARA/MA0729.1/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---TGAGTTTTTGGAC--
CATTGACCTTTTGACCTC
 A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C G T
T G A C G T C A C G A T A G C T C T A G C G T A G T A C G T A C A C G T G C A T G C A T A G C T A T C G T C G A G T A C A G T C A G C T G A T C