Information for 14-ATTTGTGTTAAAA (Motif 31)

C G T A A C G T A C G T A C G T A C T G A C G T C A T G A G C T A C G T C G T A C G T A C G T A C T G A
Reverse Opposite:
A G C T A C G T A C G T A C G T C G T A C T G A G A T C C G T A A G T C C G T A C G T A C G T A A C G T
p-value:1e-7
log p-value:-1.726e+01
Information Content per bp:1.934
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets29.0 +/- 26.9bp
Average Position of motif in Background74.4 +/- 10.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0032.1_IRC900814_1/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ATTTGTGTTAAAA
GNNATTTGTCGTAANN
 A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C T G A C G T C A T G A G C T A C G T C G T A C G T A C G T A C T G A
T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T

HOXA5/MA0158.1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ATTTGTGTTAAAA
AATTAGTG------
 A C G T C G T A A C G T A C G T A C G T A C T G A C G T C A T G A G C T A C G T C G T A C G T A C G T A C T G A
T G C A C G T A A G C T C G A T G C T A T A C G G A C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ATTTGTGTTAAAA
TAATTGTTCTAAAC
 A C G T C G T A A C G T A C G T A C G T A C T G A C G T C A T G A G C T A C G T C G T A C G T A C G T A C T G A
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

Sox3/MA0514.1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ATTTGTGTTAAAA
CCTTTGTTTT----
 A C G T C G T A A C G T A C G T A C G T A C T G A C G T C A T G A G C T A C G T C G T A C G T A C G T A C T G A
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ATTTGTGTTAAAA
TTCAATTGTTCTAAAA
 A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C T G A C G T C A T G A G C T A C G T C G T A C G T A C G T A C T G A
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ATTTGTGTTAAAA--
ATTTGCATAACAATG
 C G T A A C G T A C G T A C G T A C T G A C G T C A T G A G C T A C G T C G T A C G T A C G T A C T G A A C G T A C G T
G C T A G C A T G A C T G C A T T C A G G T A C G C T A G C A T C T G A G C T A T A G C G C T A C T G A C G A T C T A G

PB0168.1_Sox14_2/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----ATTTGTGTTAAAA
NNNCCATTGTGTNAN--
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C T G A C G T C A T G A G C T A C G T C G T A C G T A C G T A C T G A
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G A C G T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:ATTTGTGTTAAAA
--AGGTGTTAAT-
 C G T A A C G T A C G T A C G T A C T G A C G T C A T G A G C T A C G T C G T A C G T A C G T A C T G A
A C G T A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ATTTGTGTTAAAA-
NNTTTTGTTTTGATNT
 A C G T A C G T C G T A A C G T A C G T A C G T A C T G A C G T C A T G A G C T A C G T C G T A C G T A C G T A C T G A A C G T
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ATTTGTGTTAAAA
-AAGGTGTKAA--
 C G T A A C G T A C G T A C G T A C T G A C G T C A T G A G C T A C G T C G T A C G T A C G T A C T G A
A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T