Information for 12-TGGTCATHCT (Motif 30)

C A G T C T A G T C A G A G C T T A G C C G T A A C G T G T A C T G A C G A C T
Reverse Opposite:
C T G A A C T G C A T G T G C A A C G T A T C G T C G A A G T C G A T C G T C A
p-value:1e-7
log p-value:-1.816e+01
Information Content per bp:1.696
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.62%
Number of Background Sequences with motif248.4
Percentage of Background Sequences with motif0.51%
Average Position of motif in Targets41.3 +/- 22.8bp
Average Position of motif in Background49.2 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:TGGTCATHCT
--GTCATN--
 C A G T C T A G T C A G A G C T T A G C C G T A A C G T G T A C T G A C G A C T
A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGGTCATHCT
AGGTCA----
 C A G T C T A G T C A G A G C T T A G C C G T A A C G T G T A C T G A C G A C T
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TGGTCATHCT
AGRGGTCA----
 A C G T A C G T C A G T C T A G T C A G A G C T T A G C C G T A A C G T G T A C T G A C G A C T
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGGTCATHCT-----
AGGTCACCCTGACCT
 C A G T C T A G T C A G A G C T T A G C C G T A A C G T G T A C T G A C G A C T A C G T A C G T A C G T A C G T A C G T
C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

PB0108.1_Atf1_2/Jaspar

Match Rank:5
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TGGTCATHCT
NTTATTCGTCATNC-
 A C G T A C G T A C G T A C G T A C G T C A G T C T A G T C A G A G C T T A G C C G T A A C G T G T A C T G A C G A C T
C A T G G C A T G C A T T C G A G A C T C A G T A G T C T A C G G A C T G A T C T C G A A G C T G A C T A T G C A C G T

POL002.1_INR/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TGGTCATHCT-
---TCAGTCTT
 C A G T C T A G T C A G A G C T T A G C C G T A A C G T G T A C T G A C G A C T A C G T
A C G T A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T

RORA/MA0071.1/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TGGTCATHCT
ATCAAGGTCA----
 A C G T A C G T A C G T A C G T C A G T C T A G T C A G A G C T T A G C C G T A A C G T G T A C T G A C G A C T
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TGGTCATHCT
TRAGGTCA----
 A C G T A C G T C A G T C T A G T C A G A G C T T A G C C G T A A C G T G T A C T G A C G A C T
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGGTCATHCT------
-GGTCANNGTGACCTN
 C A G T C T A G T C A G A G C T T A G C C G T A A C G T G T A C T G A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:10
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------TGGTCATHCT
CGCGCCGGGTCACGTA
 A C G T A C G T A C G T A C G T A C G T A C G T C A G T C T A G T C A G A G C T T A G C C G T A A C G T G T A C T G A C G A C T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A