Information for 13-AAAAGGAAAATGC (Motif 27)

C G T A C G T A C G T A C G T A A C T G A C T G C G T A C G T A G T C A C G T A C G A T A C T G A G T C
Reverse Opposite:
C T A G A G T C C G T A A C G T A C G T A C G T C G A T A G T C A G T C A C G T A C G T A C G T C G A T
p-value:1e-8
log p-value:-1.895e+01
Information Content per bp:1.930
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.8 +/- 25.2bp
Average Position of motif in Background34.8 +/- 18.3bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC3/MA0625.1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AAAAGGAAAATGC
-AATGGAAAAT--
 C G T A C G T A C G T A C G T A A C T G A C T G C G T A C G T A G T C A C G T A C G A T A C T G A G T C
A C G T C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AAAAGGAAAATGC
-AATGGAAAAT--
 C G T A C G T A C G T A C G T A A C T G A C T G C G T A C G T A G T C A C G T A C G A T A C T G A G T C
A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AAAAGGAAAATGC
-NATGGAAAAN--
 C G T A C G T A C G T A C G T A A C T G A C T G C G T A C G T A G T C A C G T A C G A T A C T G A G T C
A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AAAAGGAAAATGC
GAGAACCGAAACTG-
 A C G T A C G T C G T A C G T A C G T A C G T A A C T G A C T G C G T A C G T A G T C A C G T A C G A T A C T G A G T C
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G A C G T

IRF7/MA0772.1/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AAAAGGAAAATGC
ACGAAAGCGAAAGT--
 A C G T A C G T A C G T C G T A C G T A C G T A C G T A A C T G A C T G C G T A C G T A G T C A C G T A C G A T A C T G A G T C
G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AAAAGGAAAATGC
-NNTGGAAANN--
 C G T A C G T A C G T A C G T A A C T G A C T G C G T A C G T A G T C A C G T A C G A T A C T G A G T C
A C G T C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AAAAGGAAAATGC
GAAAMTGAAACT--
 A C G T C G T A C G T A C G T A C G T A A C T G A C T G C G T A C G T A G T C A C G T A C G A T A C T G A G T C
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:8
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AAAAGGAAAATGC
---TGGAAAA---
 C G T A C G T A C G T A C G T A A C T G A C T G C G T A C G T A G T C A C G T A C G A T A C T G A G T C
A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AAAAGGAAAATGC
GGAAANTGAAACTNA
 A C G T A C G T C G T A C G T A C G T A C G T A A C T G A C T G C G T A C G T A G T C A C G T A C G A T A C T G A G T C
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AAAAGGAAAATGC
AGAAACGAAAGT--
 A C G T C G T A C G T A C G T A C G T A A C T G A C T G C G T A C G T A G T C A C G T A C G A T A C T G A G T C
T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T A C G T