Information for 8-AGGAAAGTTCTCA (Motif 19)

C G T A A C T G A C T G C G T A C T G A C G T A A C T G A C G T A C G T A G T C C G A T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A C T A G C G T A G T C A G T A C A C G T A G C T A C G T A G T C A G T C A C G T
p-value:1e-9
log p-value:-2.239e+01
Information Content per bp:1.930
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets72.0 +/- 30.3bp
Average Position of motif in Background42.4 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGGAAAGTTCTCA
AAGGCAAGTGT---
 A C G T C G T A A C T G A C T G C G T A C T G A C G T A A C T G A C G T A C G T A G T C C G A T A G T C C G T A
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGGAAAGTTCTCA
ANGNAAAGGTCA--
 A C G T C G T A A C T G A C T G C G T A C T G A C G T A A C T G A C G T A C G T A G T C C G A T A G T C C G T A
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AGGAAAGTTCTCA
NACAGGAAAT------
 A C G T A C G T A C G T C G T A A C T G A C T G C G T A C T G A C G T A A C T G A C G T A C G T A G T C C G A T A G T C C G T A
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGGAAAGTTCTCA--
TCTCAAAGGTCACCTG
 A C G T C G T A A C T G A C T G C G T A C T G A C G T A A C T G A C G T A C G T A G T C C G A T A G T C C G T A A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

NFATC1/MA0624.1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AGGAAAGTTCTCA
NNTGGAAANN-----
 A C G T A C G T C G T A A C T G A C T G C G T A C T G A C G T A A C T G A C G T A C G T A G T C C G A T A G T C C G T A
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGGAAAGTTCTCA
AATGGAAAAT-----
 A C G T A C G T C G T A A C T G A C T G C G T A C T G A C G T A A C T G A C G T A C G T A G T C C G A T A G T C C G T A
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AGGAAAGTTCTCA
AGAGGAA--------
 A C G T A C G T C G T A A C T G A C T G C G T A C T G A C G T A A C T G A C G T A C G T A G T C C G A T A G T C C G T A
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AGGAAAGTTCTCA-----
---AGNGTTCTAATGANN
 C G T A A C T G A C T G C G T A C T G A C G T A A C T G A C G T A C G T A G T C C G A T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---AGGAAAGTTCTCA
NDCAGGAARTNN----
 A C G T A C G T A C G T C G T A A C T G A C T G C G T A C T G A C G T A A C T G A C G T A C G T A G T C C G A T A G T C C G T A
T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G A C G T A C G T A C G T A C G T

PKNOX1/MA0782.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGGAAAGTTCTCA
-TGACAGGTGTCA
 C G T A A C T G A C T G C G T A C T G A C G T A A C T G A C G T A C G T A G T C C G A T A G T C C G T A
A C G T G A C T T A C G C T G A G T A C C T G A C A T G T A C G A G C T T C A G G C A T T A G C C G T A