Information for 2-CCGTATAGAGAAG (Motif 5)

G T A C G A T C A C T G A C G T G T C A A G C T C G T A A C T G C G T A A C T G C G T A C G T A C T A G
Reverse Opposite:
G A T C A C G T A C G T A G T C C G A T A G T C A C G T C T G A A C G T G T C A T A G C C A T G A C T G
p-value:1e-11
log p-value:-2.678e+01
Information Content per bp:1.815
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.0 +/- 27.2bp
Average Position of motif in Background62.8 +/- 5.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA3/MA0037.2/Jaspar

Match Rank:1
Score:0.60
Offset:6
Orientation:forward strand
Alignment:CCGTATAGAGAAG-
------AGATAAGA
 G T A C G A T C A C T G A C G T G T C A A G C T C G T A A C T G C G T A A C T G C G T A C G T A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A

Gata1/MA0035.3/Jaspar

Match Rank:2
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CCGTATAGAGAAG--
----ANAGATAAGAA
 G T A C G A T C A C T G A C G T G T C A A G C T C G T A A C T G C G T A A C T G C G T A C G T A C T A G A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A

SMAD3/MA0795.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCGTATAGAGAAG
-CGTCTAGACA--
 G T A C G A T C A C T G A C G T G T C A A G C T C G T A A C T G C G T A A C T G C G T A C G T A C T A G
A C G T G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CCGTATAGAGAAG--
---GAAAGTGAAAGT
 G T A C G A T C A C T G A C G T G T C A A G C T C G T A A C T G C G T A A C T G C G T A C G T A C T A G A C G T A C G T
A C G T A C G T A C G T T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

PB0021.1_Gata3_1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCGTATAGAGAAG--------
TTTTTAGAGATAAGAAATAAAG
 A C G T G T A C G A T C A C T G A C G T G T C A A G C T C G T A A C T G C G T A A C T G C G T A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G

PB0139.1_Irf5_2/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCGTATAGAGAAG---
-TTGACCGAGAATTCC
 G T A C G A T C A C T G A C G T G T C A A G C T C G T A A C T G C G T A A C T G C G T A C G T A C T A G A C G T A C G T A C G T
A C G T A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

PB0078.1_Srf_1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCGTATAGAGAAG
TTCCATATATGGAA-
 A C G T A C G T G T A C G A T C A C T G A C G T G T C A A G C T C G T A A C T G C G T A A C T G C G T A C G T A C T A G
G C A T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A G C A T C T A G C A T G G C A T G T C A A C G T

Stat6/MA0520.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCGTATAGAGAAG-
CATTTCCTGAGAAAT
 A C G T G T A C G A T C A C T G A C G T G T C A A G C T C G T A A C T G C G T A A C T G C G T A C G T A C T A G A C G T
A T G C C G T A A G C T A C G T C G A T G T A C G A T C C G A T T A C G C T G A C A T G C G T A C T G A T G C A G A C T

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CCGTATAGAGAAG-
----NVAGATAAGR
 G T A C G A T C A C T G A C G T G T C A A G C T C G T A A C T G C G T A A C T G C G T A C G T A C T A G A C G T
A C G T A C G T A C G T A C G T T C A G T A G C G C T A C A T G C T G A G C A T C G T A C T G A T A C G T C G A

IRF2/MA0051.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CCGTATAGAGAAG-------
--GGAAAGCGAAACCAAAAC
 G T A C G A T C A C T G A C G T G T C A A G C T C G T A A C T G C G T A A C T G C G T A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C