Information for 10-TCAGACTTGC (Motif 21)

A C G T A G T C T C G A C T A G T C G A G T A C A G C T A C G T T C A G G T A C
Reverse Opposite:
C A T G A G T C G T C A C T G A A C T G A G C T A G T C A C G T T C A G C G T A
p-value:1e-8
log p-value:-1.847e+01
Information Content per bp:1.827
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.92%
Number of Background Sequences with motif153.5
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets40.9 +/- 25.2bp
Average Position of motif in Background48.9 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TCAGACTTGC---
--NNACTTGCCTT
 A C G T A G T C T C G A C T A G T C G A G T A C A G C T A C G T T C A G G T A C A C G T A C G T A C G T
A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TCAGACTTGC
BCAGACWA--
 A C G T A G T C T C G A C T A G T C G A G T A C A G C T A C G T T C A G G T A C
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TCAGACTTGC
TCACACCT--
 A C G T A G T C T C G A C T A G T C G A G T A C A G C T A C G T T C A G G T A C
A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TCAGACTTGC
TCACACCT--
 A C G T A G T C T C G A C T A G T C G A G T A C A G C T A C G T T C A G G T A C
G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TCAGACTTGC
KTTCACACCT--
 A C G T A C G T A C G T A G T C T C G A C T A G T C G A G T A C A G C T A C G T T C A G G T A C
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TCAGACTTGC
TTTCACACCT--
 A C G T A C G T A C G T A G T C T C G A C T A G T C G A G T A C A G C T A C G T T C A G G T A C
C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TCAGACTTGC
--RTACGTGC
 A C G T A G T C T C G A C T A G T C G A G T A C A G C T A C G T T C A G G T A C
A C G T A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C

MGA/MA0801.1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TCAGACTTGC
TCACACCT--
 A C G T A G T C T C G A C T A G T C G A G T A C A G C T A C G T T C A G G T A C
G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TCAGACTTGC
CCAGACRSVB
 A C G T A G T C T C G A C T A G T C G A G T A C A G C T A C G T T C A G G T A C
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

TBX4/MA0806.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TCAGACTTGC
TCACACCT--
 A C G T A G T C T C G A C T A G T C G A G T A C A G C T A C G T T C A G G T A C
G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T A C G T