Information for 8-AAAATTAAAACCA (Motif 13)

G C T A G T C A G C T A C G T A A G C T C G A T T G C A G C T A T G C A C T G A A G T C T A G C C T G A
Reverse Opposite:
G A C T A T C G T C A G G A C T A C G T C G A T A C G T G C T A T C G A G C A T C A G T A C G T C A G T
p-value:1e-9
log p-value:-2.180e+01
Information Content per bp:1.643
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.69%
Number of Background Sequences with motif90.3
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets43.9 +/- 30.8bp
Average Position of motif in Background46.9 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AAAATTAAAACCA
GAAAMTGAAACT-
 G C T A G T C A G C T A C G T A A G C T C G A T T G C A G C T A T G C A C T G A A G T C T A G C C T G A
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AAAATTAAAACCA
GAAASYGAAASY-
 G C T A G T C A G C T A C G T A A G C T C G A T T G C A G C T A T G C A C T G A A G T C T A G C C T G A
C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AAAATTAAAACCA----
-ATATCAAAACAAAACA
 G C T A G T C A G C T A C G T A A G C T C G A T T G C A G C T A T G C A C T G A A G T C T A G C C T G A A C G T A C G T A C G T A C G T
A C G T G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PB0033.1_Irf3_1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AAAATTAAAACCA
GAGAACCGAAACTG
 A C G T G C T A G T C A G C T A C G T A A G C T C G A T T G C A G C T A T G C A C T G A A G T C T A G C C T G A
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AAAATTAAAACCA
GAAACTGAAACT-
 G C T A G T C A G C T A C G T A A G C T C G A T T G C A G C T A T G C A C T G A A G T C T A G C C T G A
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:6
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----AAAATTAAAACCA---
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T A C G T A C G T A C G T G C T A G T C A G C T A C G T A A G C T C G A T T G C A G C T A T G C A C T G A A G T C T A G C C T G A A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

IRF2/MA0051.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AAAATTAAAACCA----
GGAAAGCGAAACCAAAAC
 A C G T G C T A G T C A G C T A C G T A A G C T C G A T T G C A G C T A T G C A C T G A A G T C T A G C C T G A A C G T A C G T A C G T A C G T
A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AAAATTAAAACCA-
GGAAANTGAAACTNA
 A C G T G C T A G T C A G C T A C G T A A G C T C G A T T G C A G C T A T G C A C T G A A G T C T A G C C T G A A C G T
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

PB0037.1_Isgf3g_1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AAAATTAAAACCA-
CAAAATCGAAACTAA
 A C G T G C T A G T C A G C T A C G T A A G C T C G A T T G C A G C T A T G C A C T G A A G T C T A G C C T G A A C G T
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A

Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AAAATTAAAACCA-----
YTAATTRAWWCCAGATGT
 G C T A G T C A G C T A C G T A A G C T C G A T T G C A G C T A T G C A C T G A A G T C T A G C C T G A A C G T A C G T A C G T A C G T A C G T
G A C T C G A T C T G A G T C A G A C T C G A T T C G A C G T A G C T A G C T A T G A C G T A C C G T A A C T G T G C A C G A T A C T G A C G T