Information for 10-TCAAGAGGGG (Motif 25)

A C G T A G T C C G T A C G T A A C T G C G T A A T C G A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C A T G C A C G T A G T C A C G T A C G T A C T G C G T A
p-value:1e-6
log p-value:-1.395e+01
Information Content per bp:1.964
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif9.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets49.2 +/- 26.2bp
Average Position of motif in Background53.1 +/- 21.1bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-3/MA0672.1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TCAAGAGGGG
NTCAAGTGGN-
 A C G T A C G T A G T C C G T A C G T A A C T G C G T A A T C G A C T G A C T G A C T G
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TCAAGAGGGG--
NANTTTCAAGTGGTTAN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G C G T A A T C G A C T G A C T G A C T G A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

NKX2-8/MA0673.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TCAAGAGGGG
NTCAAGTGG--
 A C G T A C G T A G T C C G T A C G T A A C T G C G T A A T C G A C T G A C T G A C T G
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TCAAGAGGGG
BTBRAGTGSN-
 A C G T A C G T A G T C C G T A C G T A A C T G C G T A A T C G A C T G A C T G A C T G
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TCAAGAGGGG--
AANTTCAAGTGGCTTN
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G C G T A A T C G A C T G A C T G A C T G A C G T A C G T
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TCAAGAGGGG---
---GGAGGGGGAA
 A C G T A G T C C G T A C G T A A C T G C G T A A T C G A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A

YY1/MA0095.2/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TCAAGAGGGG---
-CAAGATGGCGGC
 A C G T A G T C C G T A C G T A A C T G C G T A A T C G A C T G A C T G A C T G A C G T A C G T A C G T
A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

SCRT1/MA0743.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TCAAGAGGGG---
GAGCAACAGGTGGTT
 A C G T A C G T A C G T A G T C C G T A C G T A A C T G C G T A A T C G A C T G A C T G A C T G A C G T A C G T A C G T
T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

SCRT2/MA0744.1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TCAAGAGGGG-
ATGCAACAGGTGG
 A C G T A C G T A C G T A G T C C G T A C G T A A C T G C G T A A T C G A C T G A C T G A C T G A C G T
T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G

PH0113.1_Nkx2-4/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TCAAGAGGGG--
AATTTCAAGTGGCTTN
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G C G T A A T C G A C T G A C T G A C T G A C G T A C G T
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A