Information for 10-GGGAAATTTCCCA (Motif 19)

C T A G A C T G A C T G C T G A G T C A T C G A A C G T A C G T A G C T A G T C A G T C A G T C C T G A
Reverse Opposite:
G A C T A C T G C T A G A C T G C T G A C G T A T G C A A G C T A C G T A G C T A G T C A G T C A G T C
p-value:1e-8
log p-value:-1.993e+01
Information Content per bp:1.817
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.2 +/- 13.6bp
Average Position of motif in Background44.0 +/- 17.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:GGGAAATTTCCCA
-GGGAATTTCC--
 C T A G A C T G A C T G C T G A G T C A T C G A A C G T A C G T A G C T A G T C A G T C A G T C C T G A
A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:2
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-GGGAAATTTCCCA
NGGGGATTTCCC--
 A C G T C T A G A C T G A C T G C T G A G T C A T C G A A C G T A C G T A G C T A G T C A G T C A G T C C T G A
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GGGAAATTTCCCA
-GGGAATTTCC--
 C T A G A C T G A C T G C T G A G T C A T C G A A C G T A C G T A G C T A G T C A G T C A G T C C T G A
A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GGGAAATTTCCCA
-GGGGATTTCC--
 C T A G A C T G A C T G C T G A G T C A T C G A A C G T A C G T A G C T A G T C A G T C A G T C C T G A
A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.68
Offset:5
Orientation:forward strand
Alignment:GGGAAATTTCCCA--
-----HTTTCCCASG
 C T A G A C T G A C T G C T G A G T C A T C G A A C G T A C G T A G C T A G T C A G T C A G T C C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

NFKB2/MA0778.1/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGGAAATTTCCCA
AGGGGAATCCCCT
 C T A G A C T G A C T G C T G A G T C A T C G A A C G T A C G T A G C T A G T C A G T C A G T C C T G A
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

REL/MA0101.1/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGGAAATTTCCCA
GGGGATTTCC---
 C T A G A C T G A C T G C T G A G T C A T C G A A C G T A C G T A G C T A G T C A G T C A G T C C T G A
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GGGAAATTTCCCA
GGGGGAATCCCC-
 C T A G A C T G A C T G C T G A G T C A T C G A A C G T A C G T A G C T A G T C A G T C A G T C C T G A
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGGAAATTTCCCA
AGGGGATTCCCCT
 C T A G A C T G A C T G C T G A G T C A T C G A A C G T A C G T A G C T A G T C A G T C A G T C C T G A
T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GGGAAATTTCCCA--
NNTTCTGGAANNTTCTAGAA
 A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G C T G A G T C A T C G A A C G T A C G T A G C T A G T C A G T C A G T C C T G A A C G T A C G T
A T G C T A G C A G C T A G C T T G A C G A C T T C A G T A C G G T C A C T G A A T C G T A G C G A C T C A G T A G T C A G C T T C G A A T C G T G C A T G C A