Information for 8-GCTGGCAGCTTCG (Motif 13)

A T C G A G T C C G A T A C T G A T C G G T A C C G T A C A T G A T G C A G C T A C G T G A T C A C T G
Reverse Opposite:
G T A C C A T G C G T A C T G A A T C G G A T C A C G T A C T G A T G C A G T C C G T A A C T G T A G C
p-value:1e-10
log p-value:-2.337e+01
Information Content per bp:1.806
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif25.1
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets62.1 +/- 24.1bp
Average Position of motif in Background45.4 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GCTGGCAGCTTCG
GCCGCCATCTTG-
 A T C G A G T C C G A T A C T G A T C G G T A C C G T A C A T G A T G C A G C T A C G T G A T C A C T G
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GCTGGCAGCTTCG
CTTGGCAA-----
 A T C G A G T C C G A T A C T G A T C G G T A C C G T A C A T G A T G C A G C T A C G T G A T C A C T G
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCTGGCAGCTTCG
VGCTGWCAVB----
 A C G T A T C G A G T C C G A T A C T G A T C G G T A C C G T A C A T G A T G C A G C T A C G T G A T C A C T G
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GCTGGCAGCTTCG
GCNGCCATCTTG-
 A T C G A G T C C G A T A C T G A T C G G T A C C G T A C A T G A T G C A G C T A C G T G A T C A C T G
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GCTGGCAGCTTCG
--TGTCANYT---
 A T C G A G T C C G A T A C T G A T C G G T A C C G T A C A T G A T G C A G C T A C G T G A T C A C T G
A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GCTGGCAGCTTCG
---CGCAGCTGCG
 A T C G A G T C C G A T A C T G A T C G G T A C C G T A C A T G A T G C A G C T A C G T G A T C A C T G
A C G T A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GCTGGCAGCTTCG----
NNTTCTGGAANNTTCTAGAA
 A C G T A C G T A C G T A T C G A G T C C G A T A C T G A T C G G T A C C G T A C A T G A T G C A G C T A C G T G A T C A C T G A C G T A C G T A C G T A C G T
A T G C T A G C A G C T A G C T T G A C G A C T T C A G T A C G G T C A C T G A A T C G T A G C G A C T C A G T A G T C A G C T T C G A A T C G T G C A T G C A

Myb/MA0100.2/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCTGGCAGCTTCG
--TGGCAGTTGN-
 A T C G A G T C C G A T A C T G A T C G G T A C C G T A C A T G A T G C A G C T A C G T G A T C A C T G
A C G T A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCTGGCAGCTTCG
GCTGTCAA-----
 A T C G A G T C C G A T A C T G A T C G G T A C C G T A C A T G A T G C A G C T A C G T G A T C A C T G
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCTGGCAGCTTCG
GGTTGGCAT-----
 A C G T A T C G A G T C C G A T A C T G A T C G G T A C C G T A C A T G A T G C A G C T A C G T G A T C A C T G
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T