Information for 6-TCCAGGTCTCGGC (Motif 11)

A G C T T A G C G T A C C G T A A T C G A C T G A G C T A G T C G A C T T G A C C T A G A T C G T A G C
Reverse Opposite:
A C T G A T G C G A T C A C T G C G T A T A C G C T G A A G T C A T G C G C A T A C T G A C T G C T G A
p-value:1e-10
log p-value:-2.402e+01
Information Content per bp:1.749
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.96%
Number of Background Sequences with motif107.7
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets41.7 +/- 21.2bp
Average Position of motif in Background44.5 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TCCAGGTCTCGGC---
--CAGGCCNNGGCCNN
 A G C T T A G C G T A C C G T A A T C G A C T G A G C T A G T C G A C T T G A C C T A G A T C G T A G C A C G T A C G T A C G T
A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TCCAGGTCTCGGC
-CNAGGCCT----
 A G C T T A G C G T A C C G T A A T C G A C T G A G C T A G T C G A C T T G A C C T A G A T C G T A G C
A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TCCAGGTCTCGGC
NTCAAGGTCA----
 A C G T A G C T T A G C G T A C C G T A A T C G A C T G A G C T A G T C G A C T T G A C C T A G A T C G T A G C
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCCAGGTCTCGGC
-CTAGGCCT----
 A G C T T A G C G T A C C G T A A T C G A C T G A G C T A G T C G A C T T G A C C T A G A T C G T A G C
A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TCCAGGTCTCGGC
-VCAGGTRDRY--
 A G C T T A G C G T A C C G T A A T C G A C T G A G C T A G T C G A C T T G A C C T A G A T C G T A G C
A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TCCAGGTCTCGGC
BTCAAGGTCA----
 A C G T A G C T T A G C G T A C C G T A A T C G A C T G A G C T A G T C G A C T T G A C C T A G A T C G T A G C
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TCCAGGTCTCGGC--
GCGGAGGTGTCGCCTC
 A C G T A G C T T A G C G T A C C G T A A T C G A C T G A G C T A G T C G A C T T G A C C T A G A T C G T A G C A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TCCAGGTCTCGGC
TCAAGGTCAN---
 A G C T T A G C G T A C C G T A A T C G A C T G A G C T A G T C G A C T T G A C C T A G A T C G T A G C
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TCCAGGTCTCGGC
NNCAGGTGNN---
 A G C T T A G C G T A C C G T A A T C G A C T G A G C T A G T C G A C T T G A C C T A G A T C G T A G C
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TCCAGGTCTCGGC
ATCAAGGTCA----
 A C G T A G C T T A G C G T A C C G T A A T C G A C T G A G C T A G T C G A C T T G A C C T A G A T C G T A G C
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T