Information for 3-TTGGCATTTTNTATAC (Motif 8)

G A C T A C G T A C T G C A T G T A G C G C T A A C G T A C G T A C G T A C G T G T A C A G C T C G T A A C G T T C G A A G T C
Reverse Opposite:
T A C G A G C T G T C A C G A T C T G A C A T G G T C A C G T A C G T A T C G A C G A T A T C G G T A C G T A C G T C A C T G A
p-value:1e-11
log p-value:-2.629e+01
Information Content per bp:1.673
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.52%
Number of Background Sequences with motif14.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets49.0 +/- 23.6bp
Average Position of motif in Background52.3 +/- 17.4bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTGGCATTTTNTATAC
NNTTGGCANN--------
 A C G T A C G T G A C T A C G T A C T G C A T G T A G C G C T A A C G T A C G T A C G T A C G T G T A C A G C T C G T A A C G T T C G A A G T C
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TTGGCATTTTNTATAC---
---NNNNTTTGTTTACNNT
 G A C T A C G T A C T G C A T G T A G C G C T A A C G T A C G T A C G T A C G T G T A C A G C T C G T A A C G T T C G A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

Hic1/MA0739.1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTGGCATTTTNTATAC
GGTTGGCAT---------
 A C G T A C G T G A C T A C G T A C T G C A T G T A G C G C T A A C G T A C G T A C G T A C G T G T A C A G C T C G T A A C G T T C G A A G T C
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:4
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TTGGCATTTTNTATAC-----
----NNNTTTGTTTACTTTTN
 G A C T A C G T A C T G C A T G T A G C G C T A A C G T A C G T A C G T A C G T G T A C A G C T C G T A A C G T T C G A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G G A C T A T G C C G A T C G A T C G A T C T A G C G A T C A G T C A G T C T G A A G T C G C A T G C A T C G A T C G A T C G A T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TTGGCATTTTNTATAC
TTGGCA----------
 G A C T A C G T A C T G C A T G T A G C G C T A A C G T A C G T A C G T A C G T G T A C A G C T C G T A A C G T T C G A A G T C
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:6
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:TTGGCATTTTNTATAC-----
------CTTTGTTTACTTTTN
 G A C T A C G T A C T G C A T G T A G C G C T A A C G T A C G T A C G T A C G T G T A C A G C T C G T A A C G T T C G A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCATTTTNTATAC
NTTGGCANN--------
 A C G T G A C T A C G T A C T G C A T G T A G C G C T A A C G T A C G T A C G T A C G T G T A C A G C T C G T A A C G T T C G A A G T C
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Foxj3/MA0851.1/Jaspar

Match Rank:8
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TTGGCATTTTNTATAC-----
----NNNTTTGTTTACNTTNN
 G A C T A C G T A C T G C A T G T A G C G C T A A C G T A C G T A C G T A C G T G T A C A G C T C G T A A C G T T C G A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TTGGCATTTTNTATAC-----
----NNNTTTGTTTACNTTNN
 G A C T A C G T A C T G C A T G T A G C G C T A A C G T A C G T A C G T A C G T G T A C A G C T C G T A A C G T T C G A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

Myb/MA0100.2/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TTGGCATTTTNTATAC
-TGGCAGTTGN-----
 G A C T A C G T A C T G C A T G T A G C G C T A A C G T A C G T A C G T A C G T G T A C A G C T C G T A A C G T T C G A A G T C
A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T A C G T A C G T A C G T A C G T