Information for 3-MTCMTTMTWTTTA (Motif 4)

G T A C A C G T A G T C G T A C A C G T A C G T T G C A A C G T C G T A A C G T A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A C G T A C G A T C G T A A C G T C G T A C G T A A C T G A C T G C G T A A C T G
p-value:1e-12
log p-value:-2.895e+01
Information Content per bp:1.880
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.5 +/- 29.0bp
Average Position of motif in Background34.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0152.1_Pou6f1_2/Jaspar

Match Rank:1
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----MTCMTTMTWTTTA
GCAACCTCATTATNNNN-
 A C G T A C G T A C G T A C G T A C G T G T A C A C G T A G T C G T A C A C G T A C G T T G C A A C G T C G T A A C G T A C G T A C G T C G T A
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T A C G T

FOXL1/MA0033.2/Jaspar

Match Rank:2
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:MTCMTTMTWTTTA-
-------TGTTTAC
 G T A C A C G T A G T C G T A C A C G T A C G T T G C A A C G T C G T A A C G T A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T C T A G A C G T C A G T A C G T C T G A G A T C

FOXD2/MA0847.1/Jaspar

Match Rank:3
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:MTCMTTMTWTTTA-
-------TGTTTAC
 G T A C A C G T A G T C G T A C A C G T A C G T T G C A A C G T C G T A A C G T A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T C A G C G A T C A G T C A G T C T G A A G T C

PB0064.1_Sox14_1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-MTCMTTMTWTTTA--
NNTAATTATAATTNNN
 A C G T G T A C A C G T A G T C G T A C A C G T A C G T T G C A A C G T C G T A A C G T A C G T A C G T C G T A A C G T A C G T
C A T G G T C A G C A T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C T A G G T A C

PB0016.1_Foxj1_1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:MTCMTTMTWTTTA----
-NNNNTTTGTTTACNNT
 G T A C A C G T A G T C G T A C A C G T A C G T T G C A A C G T C G T A A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

MF0005.1_Forkhead_class/Jaspar

Match Rank:6
Score:0.59
Offset:7
Orientation:forward strand
Alignment:MTCMTTMTWTTTA---
-------TGTTTATTT
 G T A C A C G T A G T C G T A C A C G T A C G T T G C A A C G T C G T A A C G T A C G T A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T

FOXP1/MA0481.1/Jaspar

Match Rank:7
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:MTCMTTMTWTTTA------
----CTTTGTTTACTTTTN
 G T A C A C G T A G T C G T A C A C G T A C G T T G C A A C G T C G T A A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G

FOXI1/MA0042.2/Jaspar

Match Rank:8
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:MTCMTTMTWTTTA-
-------TGTTTAC
 G T A C A C G T A G T C G T A C A C G T A C G T T G C A A C G T C G T A A C G T A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C A T A C G T A C G T C G T A A G T C

FOXO4/MA0848.1/Jaspar

Match Rank:9
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:MTCMTTMTWTTTA-
-------TGTTTAC
 G T A C A C G T A G T C G T A C A C G T A C G T T G C A A C G T C G T A A C G T A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G G A C T C A G T A C G T G C T A A G T C

PH0151.1_Pou6f1_1/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----MTCMTTMTWTTTA
NNNACCTCATTATCNTN-
 A C G T A C G T A C G T A C G T A C G T G T A C A C G T A G T C G T A C A C G T A C G T T G C A A C G T C G T A A C G T A C G T A C G T C G T A
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C A C G T