Information for 12-GGTTTTTAAAAAC (Motif 24)

A C T G C A T G A G C T C G A T C G A T A C G T A C G T C G T A C G T A C G T A C T G A C T G A A G T C
Reverse Opposite:
T A C G A G C T A G C T C G A T A C G T G A C T C G T A C G T A C G T A C G T A C T G A G A T C G T A C
p-value:1e-5
log p-value:-1.259e+01
Information Content per bp:1.789
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif25.6
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets46.2 +/- 26.8bp
Average Position of motif in Background48.7 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:GGTTTTTAAAAAC-
----TTTGAAACCG
 A C T G C A T G A G C T C G A T C G A T A C G T A C G T C G T A C G T A C G T A C T G A C T G A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

PB0187.1_Tcf7_2/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGTTTTTAAAAAC-
NNNTTTNTAATACNG
 A C G T A C T G C A T G A G C T C G A T C G A T A C G T A C G T C G T A C G T A C G T A C T G A C T G A A G T C A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

LIN54/MA0619.1/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GGTTTTTAAAAAC
---ATTTGAATT-
 A C T G C A T G A G C T C G A T C G A T A C G T A C G T C G T A C G T A C G T A C T G A C T G A A G T C
A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:4
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GGTTTTTAAAAAC-
----TTTAATTGCN
 A C T G C A T G A G C T C G A T C G A T A C G T A C G T C G T A C G T A C G T A C T G A C T G A A G T C A C G T
A C G T A C G T A C G T A C G T C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C

PB0182.1_Srf_2/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GGTTTTTAAAAAC
NNNNTTTTTTTTTNAAC
 A C G T A C G T A C G T A C G T A C T G C A T G A G C T C G A T C G A T A C G T A C G T C G T A C G T A C G T A C T G A C T G A A G T C
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

HOXC10/MA0905.1/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GGTTTTTAAAAAC
---NTTTTACGAC
 A C T G C A T G A G C T C G A T C G A T A C G T A C G T C G T A C G T A C G T A C T G A C T G A A G T C
A C G T A C G T A C G T C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C

PB0148.1_Mtf1_2/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGTTTTTAAAAAC-
NNTTTTTCTTATNT
 A C T G C A T G A G C T C G A T C G A T A C G T A C G T C G T A C G T A C G T A C T G A C T G A A G T C A C G T
A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T

HOXD11/MA0908.1/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GGTTTTTAAAAAC
---NTTTTACGAC
 A C T G C A T G A G C T C G A T C G A T A C G T A C G T C G T A C G T A C G T A C T G A C T G A A G T C
A C G T A C G T A C G T C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C

Arid3b/MA0601.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GGTTTTTAAAAAC
-NTAATTAATAT-
 A C T G C A T G A G C T C G A T C G A T A C G T A C G T C G T A C G T A C G T A C T G A C T G A A G T C
A C G T A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:10
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GGTTTTTAAAAAC
----TTTAAT---
 A C T G C A T G A G C T C G A T C G A T A C G T A C G T C G T A C G T A C G T A C T G A C T G A A G T C
A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T